Job Description P00963 Confidence 99.78% Date Thu Jan 5 10:57:25 GMT 2012 Rank 2 Aligned Residues 271 % Identity 18% Template d1nnha_ SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.																		.																		.
Template Conservation																								.	.	.	.	.																		.																		.
Template Sequence		I	S	P	T	L	D	I	Q	T	K	I	L	E	Y	M	T	D	F	F	V	K	E	.	.	.	.	.	G	F	K	W	L	L	P	V	I	I	S	P	I	T	D	P	L	.	W	P	D	P	A	G	E	G	M	E	P	A	E	V	E	I	Y	.	G	V	K	M	R	L	T	H	S	M	I	L	H	K	Q	L	A
Template Known Secondary structure																							T	.	.	.	.	.	T											S						.		S		T	T												T	.	T							S		S
Template Predicted Secondary structure																								.	.	.	.	.																		.																		.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	.	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P
Query Conservation																									.
Alig confidence				.	.	.	.																		.																																										.	.	.	.	.	.	.
Template Conservation				.	.	.	.																																																												.	.	.	.	.	.	.
Template Sequence		I	A	.	.	.	.	M	G	L	K	K	I	F	V	L	S	P	N	I	R	L	E	S	R	Q	K	D	D	G	R	H	A	Y	E	F	T	Q	L	D	F	E	V	E	R	A	K	M	E	D	I	M	R	L	I	E	R	L	V	Y	G	L	F	R	K	A	.	.	.	.	.	.	.	E	E	W	T	G	R	E	F
Template Known Secondary structure				.	.	.	.	T	T																G	G	G		S	S	S			S											T																						.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure				.	.	.	.																																																												.	.	.	.	.	.	.
Template SS confidence
		84	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	V	W
Query Conservation
Alig confidence																													.	.	.	.	.											.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.											.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		P	K	T	K	R	F	E	V	F	E	Y	S	E	V	L	E	E	F	G	S	D	E	K	A	S	Q	E	.	.	.	.	.	M	E	E	P	F	W	I	I	N	I	.	.	.	.	.	.	.	.	P	R	E	F	Y	D	R	E	V	D	G	F	W	.	.	.	.	.	.	.	.	.	R	N	Y	D	L	I	L	P
Template Known Secondary structure					S	S													T	S	S								.	.	.	.	.		S	S								.	.	.	.	.	.	.	.				T	T	B				T	T			.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																													.	.	.	.	.											.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.										.	.	.	.	.	.	.	210
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	.	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation																					.
Alig confidence		.	.	.	.																.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	Y	G	Y	G	E	V	A	S	G	G	E	R	E	W	E	Y	E	K	I	V	A	K	I	R	K	A	G	L	N	E	D	S	F	R	P	Y	L	E	I	A	K	A	G	K	L	K	P	S	A	G	A	G	I	G	V	E	R	L	V	R	F	I	V	G	A	K	H	I	A	E	V	Q	P
Template Known Secondary structure		.	.	.	.	T	T	T									B														T	T			G	G	G	G									T	T																					T		S	S	G	G	G	G		S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions