Job Description P00963 Confidence 83.39% Date Thu Jan 5 10:57:25 GMT 2012 Rank 29 Aligned Residues 239 % Identity 19% Template d1kmma2 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.60

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.
Predicted Secondary structure																																						.	.	.	.	.																																					.	.
Query SS confidence																																						.	.	.	.	.																																					.	.
Query Sequence		Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	.	.	.	.	.	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	.	.	K
Query Conservation																																						.	.	.	.	.																																					.	.
Alig confidence																																						.	.	.	.	.														.	.	.																					.	.
Template Conservation																																																								.	.	.
Template Sequence		Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	.	.	.	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G	C	V	R
Template Known Secondary structure																							T	T	T								S													T	T	S						T		.	.	.						T	T	S							S		S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	T	L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L
Query Conservation
Alig confidence																										.			.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.			.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	E	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	.	E	R	.	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T		S	T	T															.			.		B	T	T	B		S											S			S																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.			.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170																.	.	.	.	.				.	.	.	.	180	.	.	.	.	.	.	.	.						.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.														.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.														.	.	.	.	.
Query Sequence		A	P	F	L	P	D	Q	I	H	F	V	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	L	L	S	.	.	.	R	Y	P	D	L	D	A	K	G	R	E	R	A	.	.	.	.	.	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.														.	.	.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.														.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																																				.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	I	S	E	H	V	T	L	E	L	N	S	I	G	S	L	E	A	R	A	N	Y	R	D	A	L	V	A	F	L	E	Q	H	A	L	G	D	Y	L	D	E	E	S	R	E	H	F	A	G	L	C	K	L	L	E	S	A	G	I	A	Y	T	V	N	Q	R	L	.	.	.	.	.	.	.	.	.	V	R
Template Known Secondary structure		.	.	T		G	G	G																														G	G	G	T																				T							T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																																																				.	.	.	.	.	.	.	.	.
Template SS confidence
				156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.										.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	.	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G
Query Conservation																									.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.			.																	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	D	Y	Y	N	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	E	W	V	T	N	S	L	G	S	Q	G	T	V	C	A	G	G	.	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	G	L	V	E	Q	L	G	G	R	A	T	P	A	V	G	F
Template Known Secondary structure		S	S	S				S		.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S	S	S	S							.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T					T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.																				.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.														.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.																					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	Q	S	R	L	T	M	L	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	G	L	E	R	L	V	L	L	V	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions