Job Description P00963 Confidence 99.48% Date Thu Jan 5 10:57:25 GMT 2012 Rank 4 Aligned Residues 278 % Identity 20% Template d1c0aa3 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.40

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.															.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.															.	.	.	.	.	.	.
Template Sequence		M	A	Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	.	.	.	.	.	G	F	L	D	I	E	T	P	M	L	T	K	A	T	.	.	.	.	.	.	.	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L
Template Known Secondary structure																							T	.	.	.	.	.	T								S	S	B				.	.	.	.	.	.	.	S	S	S	S								S	S	S	T	T							S		S
Template Predicted Secondary structure																								.	.	.	.	.															.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F
Query Conservation
Alig confidence				.	.	.	.																.			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																.			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	M	.	.	.	.	S	G	F	D	R	Y	Y	Q	I	V	K	C	F	R	D	.	E	D	.	L	R	A	D	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L	E	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V
Template Known Secondary structure				.	.	.	.	T	T														.			.		B	T	T	B		S											S																							.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure				.	.	.	.																.			.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260														.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A	.	.	.	.	.	G	L	N	G	D
Query Conservation																																																																								.	.	.	.	.
Alig confidence																												.	.	.	.	.																																								.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		D	L	G	D	F	P	V	M	T	F	A	E	A	E	R	R	Y	G	S	D	K	P	D	L	R	D	.	.	.	.	.	E	S	K	W	A	P	L	W	V	I	D	F	P	M	F	E	D	D	G	E	G	G	L	T	A	M	H	H	P	F	T	S	P	K	D	M	T	A	A	E	L	K	A	A	P	E	N	A	V
Template Known Secondary structure					S														S		S	S						.	.	.	.	.		S											B	S					S	S	S					S	S		T	T	B		B	S	S									S		T	T		B
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.						.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																						.																	.	.	.
Query SS confidence																						.																	.	.	.
Query Sequence		I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	.	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	.	.	.	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q	L	P	H	I	G
Query Conservation																						.																	.	.	.
Alig confidence													.									.																	.	.	.
Template Conservation													.
Template Sequence		A	N	A	Y	D	M	V	I	N	G	Y	.	E	V	G	G	G	S	V	R	I	H	N	G	D	M	Q	Q	T	V	F	G	I	L	G	I	N	E	E	E	Q	R	E	K	F	G	F	L	L	D	A	L	K	Y	G	T	P	P	H	A	G	L	A	F	G	L	D	R	L	T	M	L	L	T	G	T	D	N	I	R
Template Known Secondary structure		B	S							T	T		.								B														T	T																	T	T	T	T																				T		S		G	G
Template Predicted Secondary structure													.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.		.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
		312	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	I	A
Template Known Secondary structure		G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions