Job Description P00963 Confidence 99.28% Date Thu Jan 5 10:57:25 GMT 2012 Rank 7 Aligned Residues 265 % Identity 17% Template c3m4qA_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative; PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs) Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		T	Q	Q	V	L	Q	L	R	S	E	I	Q	W	Y	F	R	K	Y	Y	H	D	N	.	.	.	.	.	H	F	T	E	I	Q	P	P	T	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	T	L	F	K	L	Q	Y	F	.	N	E	P	A	Y	L	T	Q	S	S	Q	L	Y	L	E	S	V
Template Known Secondary structure																							T	.	.	.	.	.	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	.	T							S
Template Predicted Secondary structure																								.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.															180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	.	E	A	A	V	S	E	E	F	G	L	A	P
Query Conservation																																																																					.
Alig confidence				.	.				.	.	.													.	.	.	.	.	.	.																																							.
Template Conservation				.	.				.	.	.													.	.	.	.	.	.	.
Template Sequence		I	A	.	.	S	L	G	.	.	.	K	S	F	C	M	L	S	S	Y	R	A	E	.	.	.	.	.	.	.	H	L	A	E	Y	L	H	L	E	A	E	L	P	F	I	S	F	E	D	L	L	N	H	L	E	D	L	V	C	T	V	I	D	N	V	M	A	V	H	G	D	K	I	R	K	M	N	P	H	L	K
Template Known Secondary structure				.	.				.	.	.	S												.	.	.	.	.	.	.			S											S																																		T	T
Template Predicted Secondary structure				.	.				.	.	.													.	.	.	.	.	.	.
Template SS confidence
		213	.			.	.	.				.	.	220	.	.	.	.	.	.	.	.	.								230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	.	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.							.	.																					.	.
Template Conservation																																																										.	.																					.	.
Template Sequence		L	P	T	R	P	F	K	R	M	T	Y	A	D	A	I	K	Y	C	N	D	H	G	I	L	N	K	D	K	P	F	E	Y	G	E	D	I	S	E	K	P	E	R	Q	M	T	D	E	I	G	C	P	I	F	M	I	H	.	.	F	P	S	K	M	K	A	F	Y	M	S	K	V	P	G	H	P	D	L	T	.	.
Template Known Secondary structure					S	S																	T			S	S	S	S				T	T																	S							.	.		B	G	G	G	S		S	S	B				T	T						.	.
Template Predicted Secondary structure																																																										.	.																					.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																									.												.
Query SS confidence																									.												.
Query Sequence		S	E	L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	.	E	L	S	S	M	G	I	R	V	D	A	.	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M
Query Conservation																									.												.
Alig confidence		.	.	.	.	.	.	.								.	.	.	.	.	.				.												.																												.
Template Conservation		.	.	.	.	.	.	.								.	.	.	.	.	.																																												.
Template Sequence		.	.	.	.	.	.	.	E	S	V	D	L	L	M	.	.	.	.	.	.	P	G	V	G	E	I	V	G	G	S	M	R	I	W	N	Y	D	E	L	M	G	A	Y	K	A	N	G	L	N	P	D	P	Y	Y	W	Y	T	Q	Q	R	K	Y	G	.	S	C	P	H	G	G	Y	G	L	G	V	E	R	L	V	M
Template Known Secondary structure		.	.	.	.	.	.	.								.	.	.	.	.	.	T	T	T																							T	T				G	G	G									T	T	.
Template Predicted Secondary structure		.	.	.	.	.	.	.								.	.	.	.	.	.																																												.
Template SS confidence
									363	.	.	.	.	.	.							370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	L	G	E	D	H	I	R	K	V	C	L
Template Known Secondary structure					T		S	S	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions