Job Description P00963 Confidence 98.85% Date Thu Jan 5 10:57:25 GMT 2012 Rank 17 Aligned Residues 235 % Identity 17% Template c3i7fA_ PDB info PDB header:ligase Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica Resolution 2.80 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T	L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	.	.	.	.	.	E	R	Q	F	S	T	L	K	S
Query Conservation																																																																				.	.	.	.	.
Alig confidence																								.	.	.	.															.																										.	.	.	.	.
Template Conservation																								.	.	.	.															.
Template Sequence		H	T	P	K	L	I	A	Y	L	A	Q	S	P	Q	L	Y	K	Q	M	A	I	M	.	.	.	.	G	D	F	R	K	V	F	E	V	G	P	V	F	R	.	A	E	N	S	N	T	R	R	H	L	T	E	F	E	G	L	D	I	E	M	E	I	V	E	N	Y	H	E	C	I	D	V	M	E	K	L	F	T	F
Template Known Secondary structure					S	B				B		S		T									T	.	.	.	.	T	T													.		S				S	S	S			S												S	S		T
Template Predicted Secondary structure																								.	.	.	.															.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.											.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	.	.	.	.	.	.	.	.	.	.	Y	P	D	L	D	A	K	G	R	E	.	.	.	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G
Query Conservation																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation
Template Sequence		I	F	D	E	I	P	K	R	F	P	D	E	L	K	V	I	R	K	Q	Y	P	F	E	D	L	I	Y	R	P	F	L	R	L	T	Y	K	E	A	I	E	M	L	R	A	S	G	E	T	I	G	D	Y	D	D	F	T	T	P	Q	E	V	K	L	G	E	L	I	K	A	K	Y	N	T	D	F	Y	I	L	D	K
Template Known Secondary structure																					S									S																T	T					T	T																						S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		F	P	A	A	I	R	P	F	Y	T	M	P	D	I	D	D	P	N	Y	S	.	.	.	.	.	.	.	.	.	N	S	Y	D	V	F	V	.	.	.	.	.	.	R	G	Q	E	I	T	S	G	A	Q	R	I	H	D	P	E	F	L	M	K	R	C	I	E	K	G	V	D	P	A	T	L	K	D	Y	I	E	S
Template Known Secondary structure			B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	.	.	.	.	.	.	.	.	.	S							.	.	.	.	.	.	T	T																							T	T			G	G	G	G						T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.										.	.	.	460	.	.	.							.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	F	G	S	W	P	H	A	G	C	G	I	G	L	E	R	I	T	M	L	Y	L	G	I	P	N	I	R	K	V	T	L
Template Known Secondary structure		T	S	S																				T	T		S		G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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