Job Description P00963 Confidence 99.14% Date Thu Jan 5 10:57:25 GMT 2012 Rank 10 Aligned Residues 279 % Identity 16% Template c2xgtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.																						.	.	.	.	.	.	.	.							.
Template Conservation																								.	.	.	.	.																						.	.	.	.	.	.	.	.							.
Template Sequence		A	A	A	L	L	R	L	R	A	A	A	T	R	A	M	R	E	H	F	Y	N	A	.	.	.	.	.	G	Y	V	E	V	A	P	P	T	L	V	Q	T	Q	V	E	G	G	S	T	L	.	.	.	.	.	.	.	.	F	N	L	D	Y	F	.	G	E	Q	S	F	L	T	Q	S	S	Q	L	Y	L	E	T	C
Template Known Secondary structure																							T	.	.	.	.	.	T								S			S			S	S		G	G	G		.	.	.	.	.	.	.	.						T	.	T							S		S
Template Predicted Secondary structure																								.	.	.	.	.																						.	.	.	.	.	.	.	.							.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.									.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F
Query Conservation
Alig confidence				.	.				.	.	.											.
Template Conservation				.	.				.	.	.											.
Template Sequence		I	P	.	.	T	L	G	.	.	.	D	V	F	C	I	A	Q	S	Y	R	.	A	E	K	S	R	T	R	R	H	L	A	E	Y	A	H	V	E	A	E	C	P	F	I	T	L	D	D	L	M	E	K	I	E	E	L	V	C	D	T	V	D	R	L	L	A	D	E	E	A	K	K	L	L	E	H	I	N	P	K
Template Known Secondary structure				.	.			S	.	.	.	S										.				S		B	T	T	B		S											S																							T	S												T	T
Template Predicted Secondary structure				.	.				.	.	.											.
Template SS confidence
		307	.			.	310	.				.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		161	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.													.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	.	.	.	.	.	.	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S
Query Conservation				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																												.
Template Sequence		F	Q	P	P	E	R	P	F	L	R	M	E	Y	K	D	A	I	K	W	L	Q	E	H	N	V	E	N	E	F	G	N	T	F	T	Y	G	E	D	I	A	E	A	A	E	R	F	M	T	D	T	I	N	K	P	I	L	L	N	.	R	F	P	S	E	I	K	A	F	Y	M	Q	R	D	A	Q	D	N	T	L	T
Template Known Secondary structure							S	S																T	T		B		T	T	S	S	B			T	T	S															T	S						.			B	G	G	G	S		T	T	B		B		S	S		T	T	B	B
Template Predicted Secondary structure																																																												.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.		.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.		.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	.	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T
Query Conservation																											.
Alig confidence		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.				.
Template Conservation		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	S	V	D	L	L	M	.	.	.	.	.	.	P	G	V	G	E	I	V	G	G	S	M	R	I	W	K	F	D	E	L	S	K	A	F	K	N	V	E	I	D	P	K	P	Y	Y	W	Y	L	D	Q	R	L	Y	G	T	C	P	H	G	G	Y	G	L	G	L	E	R	F	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S							.	.	.	.	.	.	T	T	T									B														T	T			S	G	G	G									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
											460	.	.	.	.	.	.							.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	W	L	T	N	T	N	H	I	R	D	V	C	L
Template Known Secondary structure						T		S	S	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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