Job Description P00963 Confidence 54.05% Date Thu Jan 5 10:57:25 GMT 2012 Rank 37 Aligned Residues 215 % Identity 19% Template c2rhqA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: phers from staphylococcus haemolyticus- rational protein2 engineering and inhibitor studies Resolution 2.20 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	.	.	.	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T	L	G	Q	H
Query Conservation																																			.	.	.
Alig confidence															.	.	.	.	.																.	.	.															.	.
Template Conservation															.	.	.	.	.																																	.	.
Template Sequence		L	T	R	T	V	E	E	I	E	D	L	F	L	.	.	.	.	.	G	L	G	Y	E	I	V	D	G	Y	E	V	E	Q	D	Y	Y	N	F	E	A	L	N	L	P	K	S	H	P	A	R	D	.	.	M	Q	D	S	F	Y	I	T	D	E	I	L	M	R	T	H	T	S	P	V	Q	A	R	T	M	E	K	R
Template Known Secondary structure															.	.	.	.	.	T	T	T								S								T	G	G	G	T			T	T		G	G	G		.	.	T	T	T	S		B	S	S	S	S					S	S	S											T
Template Predicted Secondary structure															.	.	.	.	.																																	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F	L	P	D	Q
Query Conservation
Alig confidence																					.	.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	Q	G	P	V	K	I	I	C	P	G	K	V	Y	R	R	D	S	.	.	D	D	A	T	H	S	H	Q	F	T	Q	I	E	G	L	V	V	.	.	D	K	N	I	K	M	S	D	L	K	G	T	L	E	L	V	A	K	K	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	D	R	E
Template Known Secondary structure		T	T		S																.	.		B	T	T	B		S											.	.		S	S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																					.	.																		.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.															.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E
Query Conservation
Alig confidence							.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	L	R	P	.	.	.	.	.	S	Y	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	E	P	S	V	E	V	D	V	S	C	F	K	C	K	G	K	G	C	N	V	C	K	H	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							.	.	.	.	.			B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T												S	S	S	T	T	S			T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.						.	.	.	.																															.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q	L	P	H	I
Query Conservation
Alig confidence											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	W	I	E	I	L	G	A	G	.	M	V	H	P	N	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	G	F	D	S	N	E	Y	S	G	F	A	F	G	M	G	P	D	R	I	A	M	L	K	Y	G	I	E	D	I
Template Known Secondary structure		S									.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T			T	T	T																			T				T
Template Predicted Secondary structure											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		282	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.																		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions