Return to main results Retrieve Phyre Job Id

Job DescriptionP00963
Confidence13.08%DateThu Jan 5 10:57:25 GMT 2012
Rank75Aligned Residues127
% Identity12%Templatec1z7nB_
PDB info PDB header:transferaseChain: B: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: atp phosphoribosyl transferase (hiszg atp-prtase) from2 lactococcus lactis with bound prpp substrate
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30........ .40.........50.........60.........70.........80..
Predicted Secondary structure 





.....



















Query SS confidence 






























. . . . .











































Query Sequence  KQRQISFVKSHFSRQLEERLGLIEVQAPILS. . . . . RVGDGTQDNLSGCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLG
Query Conservation   
 

  

  
   
   


 

 




.....    
 

 
 
 
  
 
  
       


 






 

 
Alig confidence 













.....











.....














...

























Template Conservation     
   

  
  ..... 

 

 

 
                     ...       
  
 

 


    
   
Template Sequence  LRQIEGRLRKLFSL. . . . . KNYQEVMPPSFEYTQLYTALESNGKTFNQEKM. . . FQFIKHEGQSITLRYDFTLPLVRLYS
Template Known Secondary structure  .....TT




ST


SSSS

TTTB...

SS




S
Template Predicted Secondary structure  .....


















...






Template SS confidence 















































































   23......30...... ...40.........50.........60........ .70.........80.........90....
 
   83......90.........100.........110.........120.........130.........140....
Predicted Secondary structure 

























Query SS confidence 





























































Query Sequence  QHDFSAGEGLYTHMKALRPDEDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGI
Query Conservation   
 
  







 


 


 

  










 

    


  

 

 


  
Alig confidence 





















..





































Template Conservation          

  

 


 
  ..      

 
   
  
        
 
 
    
  
Template Sequence  QIKDSTSARYSYFGKIFRKEKR. . HKGRSTENYQIGIELFGESADKSELEILSLALQVIEQL
Template Known Secondary structure  T
SS


B


S..SSS

SSS
Template Predicted Secondary structure 











..












Template SS confidence 





























































   95....100.........110...... ...120.........130.........140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions