Job Description P00963 Confidence 99.12% Date Thu Jan 5 10:57:25 GMT 2012 Rank 11 Aligned Residues 280 % Identity 19% Template c1x55A_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase; PDBTitle: crystal structure of asparaginyl-trna synthetase from pyrococcus2 horikoshii complexed with asparaginyl-adenylate analogue Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.																.	.	.	.	.	.							.	.							.
Template Conservation																								.	.	.	.	.																.	.	.	.	.	.							.	.							.
Template Sequence		A	S	A	I	M	K	V	K	E	T	L	I	M	A	A	R	E	W	L	L	K	D	.	.	.	.	.	G	W	H	E	V	F	P	P	I	L	V	T	G	A	V	.	.	.	.	.	.	E	G	G	A	T	L	.	.	F	K	L	K	Y	F	.	D	K	Y	A	Y	L	S	Q	S	A	Q	L	Y	L	E	A	A
Template Known Secondary structure																							T	.	.	.	.	.	T								S			S			S	.	.	.	.	.	.	S		G	G	G		.	.						T	.	T							S		S
Template Predicted Secondary structure																								.	.	.	.	.																.	.	.	.	.	.							.	.							.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.			.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F
Query Conservation
Alig confidence				.	.				.	.	.											.
Template Conservation				.	.				.	.	.											.
Template Sequence		I	F	.	.	G	L	E	.	.	.	K	V	W	S	L	T	P	S	F	R	.	A	E	K	S	R	T	R	R	H	L	T	E	F	W	H	L	E	L	E	A	A	W	M	D	L	W	D	I	M	K	V	E	E	E	L	V	S	Y	M	V	Q	R	T	L	E	L	R	K	K	E	I	E	M	F	R	D	D	L	T
Template Known Secondary structure				.	.			S	.	.	.											.				S			T	T			S											T																															T	T		S
Template Predicted Secondary structure				.	.				.	.	.											.
Template SS confidence
		197	.			.	200	.				.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		161	.	.								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.																.	.	.	.	.	.	.
Query Sequence		L	P	D	.	.	.	.	.	.	.	Q	I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	.	.	.	.	.	.	.	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E
Query Conservation					.	.	.	.	.	.	.																.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.																.	.	.	.	.	.	.																							.	.																					.	.	.	.
Template Conservation																																																								.	.																					.	.	.	.
Template Sequence		T	L	K	N	T	E	P	P	F	P	R	I	S	Y	D	E	A	I	D	I	L	Q	S	K	G	V	N	V	E	W	G	D	D	L	G	A	D	E	E	R	V	L	T	E	E	F	D	R	P	F	F	V	Y	G	.	.	Y	P	K	H	I	K	A	F	Y	M	K	E	D	P	N	D	P	R	K	V	.	.	.	.
Template Known Secondary structure					T			S	S																T	T					T	T												G	G	G		S	S							.	.		B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	.	.	.	.
Template Predicted Secondary structure																																																								.	.																					.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q
Query Conservation
Alig confidence		.	.	.	.	.								.	.	.	.
Template Conservation		.	.	.	.	.								.	.	.	.
Template Sequence		.	.	.	.	.	L	A	S	D	M	L	A	.	.	.	.	P	E	G	Y	G	E	I	I	G	G	S	Q	R	E	D	D	Y	D	K	L	L	N	R	I	L	E	E	G	M	D	P	K	D	Y	E	W	Y	L	D	L	R	R	Y	G	S	V	P	H	S	G	F	G	L	G	V	E	R	L	V	A	W	V	L	K
Template Known Secondary structure		.	.	.	.	.	S							.	.	.	.	T	T	T	T									B														T	T			G	G	G	G						T	T	T	S	S																			T	T
Template Predicted Secondary structure		.	.	.	.	.								.	.	.	.
Template SS confidence
							345	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		307	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	H	I	R	W	A	A	L
Template Known Secondary structure			S		G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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