Job Description P00963 Confidence 99.23% Date Thu Jan 5 10:57:25 GMT 2012 Rank 8 Aligned Residues 280 % Identity 17% Template c1wydB_ PDB info PDB header:ligase Chain: B: PDB Molecule:hypothetical aspartyl-trna synthetase; PDBTitle: crystal structure of aspartyl-trna synthetase from sulfolobus tokodaii Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	A	V	I	K	I	Q	S	L	A	L	K	A	F	R	E	T	L	Y	K	E	.	.	.	.	.	G	F	I	E	I	F	T	P	K	I	I	A	.	.	.	.	.	.	.	.	.	S	A	T	E	G	G	A	Q	L	F	P	V	I	Y	F	G	K	E	A	F	L	A	Q	S	P	Q	L	Y	K	E	L	M
Template Known Secondary structure																							T	.	.	.	.	.	T								S			S	.	.	.	.	.	.	.	.	.	S		S	S	T	T									T	T							S		S
Template Predicted Secondary structure																								.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.	.	.	.	.	160	.	.	.										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	L	A	P	F
Query Conservation
Alig confidence				.	.				.	.	.															.
Template Conservation				.	.				.	.	.															.
Template Sequence		A	G	.	.	V	V	E	.	.	.	R	V	F	E	V	A	P	A	W	R	A	E	E	S	.	D	T	P	F	H	L	A	E	F	I	S	M	D	V	E	M	A	F	A	D	Y	N	D	V	M	Q	L	L	E	K	I	L	H	N	I	V	K	T	I	K	E	E	G	K	E	E	L	K	I	L	N	Y	E	P	P
Template Known Secondary structure				.	.			S	.	.	.															.		S	S	S			S											S																									S								T
Template Predicted Secondary structure				.	.				.	.	.															.
Template SS confidence
		196	.			.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		161	.	.	.					.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure						.	.	.	.												.	.	.	.	.	.
Query SS confidence						.	.	.	.												.	.	.	.	.	.
Query Sequence		L	P	D	Q	.	.	.	.	I	H	F	V	H	S	Q	E	L	L	S	.	.	.	.	.	.	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H	A
Query Conservation						.	.	.	.												.	.	.	.	.	.
Alig confidence						.	.	.	.												.	.	.	.	.	.																																																.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		E	V	K	I	P	I	K	R	L	K	Y	T	E	A	I	E	I	L	R	S	K	G	Y	N	I	K	F	G	D	D	I	G	T	P	E	L	R	I	L	N	E	E	L	K	E	D	L	Y	F	I	V	D	W	P	S	D	A	R	P	F	Y	T	K	S	K	S	E	N	P	E	L	S	.	.	.	.	.	.	.	.
Template Known Secondary structure					S	S																T	T					T	T																S		S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L	Q	L	P	H	I
Query Conservation
Alig confidence		.								.	.	.	.	.	.
Template Conservation		.								.	.	.	.	.	.
Template Sequence		.	E	S	F	D	L	I	Y	.	.	.	.	.	.	K	F	L	E	I	V	S	G	S	T	R	N	H	K	R	E	V	L	E	E	A	L	K	K	K	G	L	K	P	E	S	F	E	F	F	L	K	W	F	D	Y	G	M	P	P	H	A	G	F	G	M	G	L	A	R	L	M	V	M	L	T	G	I	Q	S	V
Template Known Secondary structure		.	S							.	.	.	.	.	.	T	T									B			S										T	T	T			G	G	G	G					G	G	G	G	S																									T
Template Predicted Secondary structure		.								.	.	.	.	.	.
Template SS confidence
			342	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		311	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	I	V	P
Template Known Secondary structure		T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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