Job Description P00963 Confidence 98.58% Date Thu Jan 5 10:57:25 GMT 2012 Rank 21 Aligned Residues 235 % Identity 20% Template c1n9wA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:aspartyl-trna synthetase 2; PDBTitle: crystal structure of the non-discriminating and archaeal-2 type aspartyl-trna synthetase from thermus thermophilus Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	A	P	L	K	V	Q	A	A	L	V	R	G	F	R	R	Y	L	D	R	Q	.	.	.	.	.	D	F	T	E	I	F	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Q	L	Y	K	Q	I	M
Template Known Secondary structure																							T	.	.	.	.	.	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.						.	.	.	.	.	.	.	150																																						.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.
Predicted Secondary structure																																													.																																		.
Query SS confidence																																													.																																		.
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	.	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	.	L	A
Query Conservation																																													.																																		.
Alig confidence				.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																		.
Template Conservation				.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	.	.	V	F	E	.	.	.	R	V	Y	E	V	A	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	L	S	L	D	V	E	M	G	F	I	A	D	E	E	D	L	M	R	L	E	E	A	L	L	A	E	M	L	E	E	A	L	N	T	A	G	D	E	I	R	L	L	G	A	T	W
Template Known Secondary structure				.	.			S	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.											S		S	S																							S							T	T
Template Predicted Secondary structure				.	.				.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		187	.			.	190	.				.	.	.	.	.	.	.	.															200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Query Sequence		P	F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	.	.	.	.	.	.	.	.	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	.	.	.	.	.	.	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S	T	P
Query Conservation																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																		.	.	.	.	.	.																			.	.	.	.								.	.
Template Conservation																																																																					.	.	.	.								.	.
Template Sequence		P	S	F	P	Q	D	I	P	R	L	T	H	A	E	A	K	R	I	L	K	E	E	L	G	Y	P	V	G	Q	D	L	S	E	E	A	E	R	L	L	G	E	Y	A	K	E	R	W	G	S	D	W	L	F	V	T	R	Y	P	R	S	V	R	P	F	Y	T	Y	.	.	.	.	P	E	E	D	G	T	T	.	.
Template Known Secondary structure					S	S	S																T	S						S	S																	T			S								B	G	G	G	S		T	T	B		.	.	.	.	B		T	T	S	B	B	.	.
Template Predicted Secondary structure																																																																					.	.	.	.								.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.					.	.	330	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	L	G	H	A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	R	S	F	D	L	L	F	.	.	.	.	.	.	R	G	L	E	I	T	S	G	G	Q	R	I	H	R	Y	E	E	L	L	E	S	L	K	A	K	G	M	D	P	E	A	F	H	G	Y	L	E	V	F	K	Y	G	M	P	P	H	G	G	F	A	I	G	A	E	R	L	T	Q	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	S							.	.	.	.	.	.	T	T									B														T	T			G	G	G	G					G	G	G	G	S				S
Template Predicted Secondary structure		.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
									335	.	.	.	.	340	.							.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		305	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	P	N	V	R	Y	A	R	A
Template Known Secondary structure		T	T		S	S	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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