Job Description P00963 Confidence 99.01% Date Thu Jan 5 10:57:25 GMT 2012 Rank 13 Aligned Residues 276 % Identity 19% Template c1b8aB_ PDB info PDB header:ligase Chain: B: PDB Molecule:protein (aspartyl-trna synthetase); PDBTitle: aspartyl-trna synthetase Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	Y	I	A	K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	H	S	L	A	K	W	K	R	Q	T
Query Conservation
Alig confidence																								.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		V	M	A	I	F	K	I	R	S	S	V	F	K	A	V	R	D	F	F	H	E	N	.	.	.	.	.	G	F	I	E	I	H	T	P	K	I	I	A	T	.	.	.	.	.	.	.	.	.	A	T	E	G	G	T	E	L	F	P	M	K	Y	F	E	E	D	A	F	L	A	E	S	P	Q	L	Y	K	E	I	M
Template Known Secondary structure																							T	.	.	.	.	.	T								S					.	.	.	.	.	.	.	.	.			S	S			S							T	T							S		S							G
Template Predicted Secondary structure																								.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		1133	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.						.	.	.	.	.	1160	.	.	.	.	.	.	.										.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.
Predicted Secondary structure																															.															.																																		.
Query SS confidence																															.															.																																		.
Query Sequence		L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	.	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	.	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A	V	S	E	E	F	G	.	L
Query Conservation																															.															.																																		.
Alig confidence				.	.	.	.																.			.					.															.																																		.
Template Conservation				.	.	.	.																.			.
Template Sequence		M	A	.	.	.	.	S	G	L	D	R	V	Y	E	I	A	P	I	F	R	A	.	E	E	.	H	N	T	T	R	H	L	N	E	A	W	S	I	D	S	E	M	A	F	I	E	D	E	E	E	V	M	S	F	L	E	R	L	V	A	H	A	I	N	Y	V	R	E	H	N	A	K	E	L	D	I	L	N	F	E
Template Known Secondary structure		G	G	.	.	.	.	T	T														.		S	.	S			T	T			S											S		S	S																														T	T
Template Predicted Secondary structure				.	.	.	.																.			.
Template SS confidence
		1199	1200					.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.		.	.		.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Query Sequence		A	P	F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	D	L	.	.	.	.	.	.	.	.	.	D	A	K	G	R	E	R	A	I	A	K	D	.	.	.	.	.	.	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	A	P	D	Y	D	D	W	S
Query Conservation																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.													.	.	.	.	.	.								.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.
Template Sequence		L	E	E	P	K	L	P	F	P	R	V	S	Y	D	K	A	L	E	I	L	G	D	L	G	K	E	I	P	W	G	E	D	I	D	T	E	G	E	R	L	L	G	K	Y	M	M	E	N	E	N	A	P	L	Y	F	L	Y	.	.	.	.	.	.	.	.	Q	Y	P	S	E	A	K	P	F	Y	I	M	K	Y	D
Template Known Secondary structure							S	S																T	T					T	T	S																					S						.	.	.	.	.	.	.	.	S		B	G	G	G	S		T	T	B				T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Template SS confidence
		1273	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.									1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		T	P	S	E	L	G	H	A	G	L	N	G	D	I	L	V	.	.	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	P	Q	T	I	G	G	G	I	G	Q	S	R	L
Query Conservation																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.							.	.									.
Template Conservation		.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	K	P	E	I	C	R	A	F	D	L	E	Y	R	G	V	.	E	I	S	S	G	G	Q	R	E	H	R	H	D	I	L	V	E	Q	I	K	E	K	G	L	N	P	E	S	F	E	F	Y	L	K	A	F	R	Y	G	M	P	P	H	G	G	F	G	L	G	A	E	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T						S							T	T		.								B														T	T			G	G	G	G					G	G	G	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
												1345	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360		.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	L	L	L	Q	L	P	H	I	G	Q	V	Q	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	Q	M	L	D	L	P	N	I	R	E	V	I	L
Template Known Secondary structure						T	T		S		G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		1414	.	.	.	.	.	1420	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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