Job Description P00963 Confidence 94.14% Date Thu Jan 5 10:57:25 GMT 2012 Rank 25 Aligned Residues 208 % Identity 21% Template c1b70A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phenylalanyl-trna synthetase; PDBTitle: phenylalanyl trna synthetase complexed with phenylalanine Resolution 2.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		K	Q	R	Q	I	S	F	V	K	S	H	F	S	R	Q	L	E	E	R	L	G	L	I	E	V	Q	A	P	I	L	S	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	G	T	Q	D	N	L	S	G	C	E	K	A	V	Q	V	K	V	K	A	L	P	D	A	Q	F	E	V	V	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence																.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		I	T	L	M	E	R	E	L	V	E	I	F	R	A	.	.	.	.	.	L	G	Y	Q	A	V	E	G	P	E	V	E	S	E	F	F	N	F	D	A	L	N	I	P	E	H	H	P	A	R	D	M	W	D	T	F	W	L	T	G	E	G	F	R	L	E	G	P	L	G	E	E	V	E	G	R	L	L	L	R	T
Template Known Secondary structure															T	.	.	.	.	.	T	T								S								T	T	T	T	T			S	S	S	T	T	G	G	G	S				B				S	S				B		T	T	S		B			S						S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	L	A	K	W	K	R	Q	T	L	G	Q	H	D	F	S	A	G	E	G	L	Y	T	H	M	K	A	L	R	P	D	E	D	R	L	S	P	L	H	S	V	Y	V	D	Q	W	D	W	E	R	V	M	G	D	G	E	R	Q	F	S	T	L	K	S	T	V	E	A	I	W	A	G	I	K	A	T	E	A	A
Query Conservation
Alig confidence																			.	.	.														.	.																		.	.																					.	.	.	.	.	.
Template Conservation																			.	.	.														.	.																		.	.																					.	.	.	.	.	.
Template Sequence		H	T	S	P	M	Q	V	R	Y	M	V	A	H	T	P	P	F	.	.	.	R	I	V	V	P	G	R	V	F	R	F	E	Q	.	.	T	D	A	T	H	E	A	V	F	H	Q	L	E	G	L	V	V	.	.	G	E	G	I	A	M	A	H	L	K	G	A	I	Y	E	L	A	Q	A	L	.	.	.	.	.	.
Template Known Secondary structure		S	S	T												S	S		.	.	.														.	.		B	T	T	B		S											.	.		T	T																		.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.														.	.																		.	.																					.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.			.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		V	S	E	E	F	G	L	A	P	F	L	P	D	Q	I	H	F	V	H	S	Q	E	L	L	S	R	Y	P	D	L	D	A	K	G	R	E	R	A	I	A	K	D	L	G	A	V	F	L	V	G	I	G	G	K	L	S	D	G	H	R	H	D	V	R	.	A	P	D	Y	D	D	W	S	T	P	S	E	L	G	H
Query Conservation																																																																		.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	P	D	S	K	V	R	F	Q	P	V	Y	F	P	F	V	E	P	G	A	Q	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S										B	T	T							.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template SS confidence
																																																										245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		A	G	L	N	G	D	I	L	V	W	N	P	V	L	E	D	A	F	E	L	S	S	M	G	I	R	V	D	A	D	T	L	K	H	Q	L	A	L	T	G	D	E	D	R	L	E	L	E	W	H	Q	A	L	L	R	G	E	M	.	.	.	.	P	Q	T	I	G	G	G	I	G	Q	S	R	L	T	M	L	L	L
Query Conservation																																																												.	.	.	.
Alig confidence		.	.	.	.	.	.																				.							.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation		.	.	.	.	.	.																				.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	F	A	V	W	W	P	E	G	G	K	W	L	E	L	G	G	A	G	M	.	V	H	P	K	V	F	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	V	D	A	Y	R	E	R	L	G	L	P	P	A	Y	R	G	V	T	G	F	A	F	G	L	G	V	E	R	L	A	M	L	R	Y
Template Known Secondary structure		.	.	.	.	.	.						T	T	T	T											.							.	.	.	.	.	.	.	.	.	.	.	.										T	T						T	T
Template Predicted Secondary structure		.	.	.	.	.	.																				.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.													.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		306	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	H	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	P	D	I
Template Known Secondary structure		T		S		G
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions