Email l.a.kelley@imperial.ac.uk Description P10031 Date Thu Jan 5 11:32:00 GMT 2012 Unique Job ID a62ff2b07df7e5e5

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3nctC_ 100.0 96 PDB header:dna binding protein, chaperone Chain: C: PDB Molecule:protein psib; PDBTitle: x-ray crystal structure of the bacterial conjugation factor psib, a2 negative regulator of reca 2 c3d30A_ 84.1 14 PDB header:peptidoglycan-binding protein Chain: A: PDB Molecule:expansin like protein; PDBTitle: structure of an expansin like protein from bacillus subtilis at 1.9a2 resolution 3 c2w56B_ 56.9 24 PDB header:unknown function Chain: B: PDB Molecule:vc0508; PDBTitle: structure of the hypothetical protein vc0508 from vibrio cholerae2 vsp-ii pathogenicity island 4 c2v1lA_ 48.6 27 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein; PDBTitle: structure of the conserved hypothetical protein vc1805 from2 pathogenicity island vpi-2 of vibrio cholerae o1 biovar3 eltor str. n16961 shares structural homology with the4 human p32 protein 5 c2noxP_ 33.7 42 PDB header:oxidoreductase Chain: P: PDB Molecule:tryptophan 2,3-dioxygenase; PDBTitle: crystal structure of tryptophan 2,3-dioxygenase from ralstonia2 metallidurans 6 d2nw8a1 19.7 32 Fold:Indolic compounds 2,3-dioxygenase-like Superfamily:Indolic compounds 2,3-dioxygenase-like Family:Bacterial tryptophan 2,3-dioxygenase 7 c2nw7C_ 17.8 32 PDB header:oxidoreductase Chain: C: PDB Molecule:tryptophan 2,3-dioxygenase; PDBTitle: crystal structure of tryptophan 2,3-dioxygenase (tdo) from2 xanthomonas campestris in complex with ferric heme.3 northeast structural genomics target xcr13 8 c2hczX_ 16.4 14 PDB header:allergen Chain: X: PDB Molecule:beta-expansin 1a; PDBTitle: crystal structure of expb1 (zea m 1), a beta-expansin and group-12 pollen allergen from maize 9 d1dx5i3 13.5 27 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:EGF/Laminin Family:EGF-type module 10 d2i0ka1 13.3 21 Fold:Ferredoxin-like Superfamily:FAD-linked oxidases, C-terminal domain Family:Cholesterol oxidase 11 d2ftxa1 13.2 18 Fold:Kinetochore globular domain-like Superfamily:Kinetochore globular domain Family:Spc25-like 12 d1c3aa_ 13.0 21 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 13 c3le4A_ 12.5 50 PDB header:nuclear protein Chain: A: PDB Molecule:microprocessor complex subunit dgcr8; PDBTitle: crystal structure of the dgcr8 dimerization domain 14 c3oibB_ 12.4 13 PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak 15 c1lshB_ 11.8 23 PDB header:lipid binding protein Chain: B: PDB Molecule:lipovitellin (lv-2); PDBTitle: lipid-protein interactions in lipovitellin 16 d1lshb_ 11.8 23 Fold:Lipovitellin-phosvitin complex; beta-sheet shell regions Superfamily:Lipovitellin-phosvitin complex; beta-sheet shell regions Family:Lipovitellin-phosvitin complex; beta-sheet shell regions 17 c3kbhE_ 11.6 31 PDB header:hydrolase Chain: E: PDB Molecule:spike glycoprotein; PDBTitle: crystal structure of nl63 respiratory coronavirus receptor-binding2 domain complexed with its human receptor 18 d1d5va_ 11.2 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 19 d1x6va1 10.6 9 Fold:PUA domain-like Superfamily:PUA domain-like Family:ATP sulfurylase N-terminal domain 20 d1whoa_ 10.6 27 Fold:C2 domain-like Superfamily:PHL pollen allergen Family:PHL pollen allergen 21 d1v7wa2 not modelled 10.6 19 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Glycosyltransferase family 36 N-terminal domain 22 c2w0tA_ not modelled 10.4 25 PDB header:transcription Chain: A: PDB Molecule:lethal(3)malignant brain tumor-like 2 protein; PDBTitle: solution structure of the fcs zinc finger domain of human2 lmbl2 23 d1qo3c_ not modelled 10.3 24 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 24 c2y7eA_ not modelled 10.0 17 PDB header:lyase Chain: A: PDB Molecule:3-keto-5-aminohexanoate cleavage enzyme; PDBTitle: crystal structure of the 3-keto-5-aminohexanoate cleavage enzyme2 (kce) from candidatus cloacamonas acidaminovorans (tetragonal form) 25 c2c5sA_ not modelled 9.9 23 PDB header:rna-binding protein Chain: A: PDB Molecule:probable thiamine biosynthesis protein thii; PDBTitle: crystal structure of bacillus anthracis thii, a trna-2 modifying enzyme containing the predicted rna-binding3 thump domain 26 c1j1eC_ not modelled 9.8 27 PDB header:contractile protein Chain: C: PDB Molecule:troponin i; PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form 27 c2qjfB_ not modelled 9.6 8 PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'- PDBTitle: crystal structure of atp-sulfurylase domain of human paps2 synthetase 1 28 c2wmhA_ not modelled 9.3 15 PDB header:hydrolase Chain: A: PDB Molecule:fucolectin-related protein; PDBTitle: crystal structure of the catalytic module of a family 982 glycoside hydrolase from streptococcus pneumoniae tigr4 in3 complex with the h-disaccharide blood group antigen. 29 c2j83B_ not modelled 9.1 10 PDB header:hydrolase Chain: B: PDB Molecule:ulilysin; PDBTitle: ulilysin metalloprotease in complex with batimastat. 30 d1j6ra_ not modelled 8.7 14 Fold:Methionine synthase activation domain-like Superfamily:Methionine synthase activation domain-like Family:Hypothetical protein TM0269 31 d1s48a_ not modelled 8.5 20 Fold:DNA/RNA polymerases Superfamily:DNA/RNA polymerases Family:RNA-dependent RNA-polymerase 32 c1v47B_ not modelled 8.3 20 PDB header:transferase Chain: B: PDB Molecule:atp sulfurylase; PDBTitle: crystal structure of atp sulfurylase from thermus2 thermophillus hb8 in complex with aps 33 d2a07f1 not modelled 8.1 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Forkhead DNA-binding domain 34 c2zibA_ not modelled 7.8 36 PDB header:antifreeze protein Chain: A: PDB Molecule:type ii antifreeze protein; PDBTitle: crystal structure analysis of calcium-independent type ii2 antifreeze protein 35 c3e4wB_ not modelled 7.7 36 PDB header:oxidoreductase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of a 33kda catalase-related protein from2 mycobacterium avium subsp. paratuberculosis. p2(1)2(1)2(1) crystal3 form. 36 c1vq0A_ not modelled 7.7 30 PDB header:chaperone Chain: A: PDB Molecule:33 kda chaperonin; PDBTitle: crystal structure of 33 kda chaperonin (heat shock protein 33 homolog)2 (hsp33) (tm1394) from thermotoga maritima at 2.20 a resolution 37 c2p04B_ not modelled 7.6 50 PDB header:transferase Chain: B: PDB Molecule:signal transduction histidine kinase; PDBTitle: 2.1 ang structure of the dimerized pas domain of signal transduction2 histidine kinase from nostoc punctiforme pcc 73102 with homology to3 the h-noxa/h-noba domain of the soluble guanylyl cyclase 38 c1xwjB_ not modelled 7.5 78 PDB header:cell adhesion/protein binding Chain: B: PDB Molecule:talin; PDBTitle: vinculin head (1-258) in complex with the talin vinculin2 binding site 3 (1945-1969) 39 d3bdwa1 not modelled 7.5 9 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 40 c2dlwA_ not modelled 6.9 37 PDB header:signaling protein Chain: A: PDB Molecule:docking protein 2, isoform a; PDBTitle: solution structure of the irs domain of human docking2 protein 2, isoform a 41 c2r5kE_ not modelled 6.6 31 PDB header:viral protein Chain: E: PDB Molecule:major capsid protein l1; PDBTitle: pentamer structure of major capsid protein l1 of human2 papilloma virus type 11 42 d1deca_ not modelled 6.6 33 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Hirudin-like 43 c2yruA_ not modelled 6.6 17 PDB header:apoptosis Chain: A: PDB Molecule:steroid receptor rna activator 1; PDBTitle: solution structure of mouse steroid receptor rna activator2 1 (sra1) protein 44 c1rkcB_ not modelled 6.4 78 PDB header:cell adhesion, structural protein Chain: B: PDB Molecule:talin; PDBTitle: human vinculin head (1-258) in complex with talin's2 vinculin binding site 3 (residues 1944-1969) 45 d1atxa_ not modelled 6.4 25 Fold:Defensin-like Superfamily:Defensin-like Family:Defensin 46 c2lc0A_ not modelled 6.3 15 PDB header:protein binding Chain: A: PDB Molecule:putative uncharacterized protein tb39.8; PDBTitle: rv0020c_nter structure 47 d1gyxa_ not modelled 6.3 15 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 48 c3tixB_ not modelled 6.3 21 PDB header:gene regulation/protein binding Chain: B: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chp1-tas3 complex core 49 c1fm5A_ not modelled 6.3 8 PDB header:immune system Chain: A: PDB Molecule:early activation antigen cd69; PDBTitle: crystal structure of human cd69 50 c2ox8A_ not modelled 6.2 17 PDB header:sugar binding protein Chain: A: PDB Molecule:scavenger receptor with c-type lectin type i; PDBTitle: human scavenger receptor c-type lectin carbohydrate-2 recognition domain. 51 c3m9zA_ not modelled 6.2 23 PDB header:signaling protein Chain: A: PDB Molecule:killer cell lectin-like receptor subfamily b member 1a; PDBTitle: crystal structure of extracellular domain of mouse nkr-p1a 52 d1t3ta1 not modelled 6.0 10 Fold:RuvA C-terminal domain-like Superfamily:FGAM synthase PurL, linker domain Family:FGAM synthase PurL, linker domain 53 d1skza1 not modelled 5.9 67 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Leech antihemostatic proteins Family:Huristasin-like 54 c3hj7A_ not modelled 5.8 27 PDB header:ligase Chain: A: PDB Molecule:trna(ile)-lysidine synthase; PDBTitle: crystal structure of tils c-terminal domain 55 d1i8gb_ not modelled 5.7 22 Fold:WW domain-like Superfamily:WW domain Family:WW domain 56 d1ib8a2 not modelled 5.6 38 Fold:Alpha-lytic protease prodomain-like Superfamily:YhbC-like, N-terminal domain Family:YhbC-like, N-terminal domain 57 d1umra_ not modelled 5.6 38 Fold:C-type lectin-like Superfamily:C-type lectin-like Family:C-type lectin domain 58 d1gpja3 not modelled 5.6 29 Fold:Ferredoxin-like Superfamily:Glutamyl tRNA-reductase catalytic, N-terminal domain Family:Glutamyl tRNA-reductase catalytic, N-terminal domain 59 c1n10A_ not modelled 5.5 13 PDB header:allergen Chain: A: PDB Molecule:pollen allergen phl p 1; PDBTitle: crystal structure of phl p 1, a major timothy grass pollen allergen 60 c3gprC_ not modelled 5.5 13 PDB header:cell adhesion Chain: C: PDB Molecule:rhodocetin subunit gamma; PDBTitle: crystal structure of rhodocetin 61 d1psea_ not modelled 5.3 71 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Photosystem I accessory protein E (PsaE) 62 d1jb0e_ not modelled 5.3 71 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Photosystem I accessory protein E (PsaE) 63 d1dxga_ not modelled 5.2 33 Fold:Rubredoxin-like Superfamily:Rubredoxin-like Family:Desulforedoxin 64 d1qp3a_ not modelled 5.0 71 Fold:SH3-like barrel Superfamily:Electron transport accessory proteins Family:Photosystem I accessory protein E (PsaE)