Fold library entry viewer: d1s48a_

Added to library: Tue Mar 16 14:41:26 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	I	R	E	H	N	K	W	I	L	K	K	I	R	F	Q	G	N	L	N	T	K	K	X	L	N	P	G	K	L	S	E	Q	L	D	R	E	G	R	K	R	N	I	Y	N	H	Q	I	G	T	I	X	S	S	A	G	I	R	L	E	K	L	P	I	V	R	A	Q	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G	G	G	G	G	G	G							S			S	S	S							S	B				T	T	S				B	S	S											T	T			G	G	G	S	S				B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	K	T	F	H	E	A	I	R	D	K	I	D	K	S	E	N	R	Q	N	P	E	L	H	N	K	L	L	E	I	F	H	T	I	A	Q	P	T	L	K	H	T	Y	G	E	V	T	W	E	Q	L	E	A	G	V	N	R	K	G	A	A	G	F	L	E	K	K	N	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T									T	T											T	T			G	G	G	T	T		B									T	T	T			T	T					T	T		S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	V	L	D	S	E	K	H	L	V	E	Q	L	V	R	D	L	K	A	G	R	K	I	K	Y	Y	E	T	A	I	P	K	N	E	K	R	D	V	S	D	D	W	Q	A	G	D	L	V	V	E	K	R	P	R	V	I	Q	Y	P	E	A	K	T	R	L	A	I	T	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													T	T																								S	S				S	S	B										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	X	Y	N	W	V	K	Q	Q	P	V	V	I	P	G	Y	E	G	K	T	P	L	F	N	I	F	D	K	V	R	K	E	W	D	S	F	N	E	P	V	A	V	S	F	D	T	K	A	W	D	T	Q	V	T	S	K	D	L	Q	L	I	G	E	I	Q	K	Y	Y	Y	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					T	T	S	S			S	T	T	B	G	G	G	S		G	G	G											T	S	S	S								B	T	T																					B		G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	W	H	K	F	I	D	T	I	T	D	H	X	T	E	V	P	V	I	T	A	D	G	E	V	Y	I	R	N	G	Q	R	G	S	G	Q	P	D	T	S	A	G	N	S	X	L	N	V	L	T	X	X	Y	A	F	C	E	S	T	G	V	P	Y	K	S	F	N	R	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G											T	T	S						T	T	S											T	T	S	T	T																									G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	I	H	V	C	G	D	D	G	F	L	I	T	E	K	G	L	G	L	K	F	A	N	K	G	X	Q	I	L	H	E	A	G	K	P	Q	K	I	T	E	G	E	K	X	K	V	A	Y	R	F	E	D	I	E	F	C	S	H	T	P	V	P	V	R	W	S	D	N	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T																									T	T			B				T	T	S	S					S	S	G	G	G			B	T	T	B								T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	H	X	A	G	R	D	T	A	V	I	L	S	K	X	A	T	R	L	D	S	S	G	E	R	G	T	T	A	Y	E	K	A	V	A	F	S	F	L	L	X	Y	S	W	N	P	L	V	R	R	I	C	L	L	V	L	S	Q	Q	P	E	T	D	P	S	K	H	A	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						S	S	S				S	S	S													T	T														S		T	T	S				S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	Y	K	G	D	P	I	G	A	Y	K	D	V	I	G	R	N	L	S	E	L	K	R	T	G	F	E	K	L	A	N	L	N	L	S	L	S	T	L	G	V	W	T	K	H	T	S	K	R	I	I	Q	D	C	V	A	I	G	K	E	E	G	N	W	L	V	K	P	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S		G	G	G													T	T					T	T		S		T	T															S	S	S			T	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
Sequence	L	I	S	S	K	T	G	H	L	Y	I	P	D	K	G	F	T	L	Q	G	K	H	Y	E	Q	L	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T														S		S	S

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PDB structure

FASTA sequence

Hidden Markov model

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