Return to main results Retrieve Phyre Job Id

Job DescriptionP10031
Confidence11.23%DateThu Jan 5 11:32:00 GMT 2012
Rank18Aligned Residues55
% Identity15%Templated1d5va_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Forkhead DNA-binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....... ..40..... ....50......
Predicted Secondary structure 








......




......
Query SS confidence 



































. . . . . .







. . . . . .










Query Sequence  KTELTLNVLQTMNAQEYEDIRAAGSDERRELTHAVM. . . . . . RELDAPDN. . . . . . WTMNGEYGSEF
Query Conservation      

  
 

 
 
 
  
  
 
 

 

 

 ......  
  
 
......
  



 


Alig confidence 



































......







......










Template Conservation     


 


  
   


 
    










 
  
 

 
     


  
 
 
     
Template Sequence  EKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMF
Template Known Secondary structure  SSSB

T

TT
SS



TTS
S





S
SSTT
Template Predicted Secondary structure 
































Template SS confidence 


































































   22.......30.........40.........50.........60.........70.........80........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions