Return to main results Retrieve Phyre Job Id

Job DescriptionP10031
Confidence12.41%DateThu Jan 5 11:32:00 GMT 2012
Rank14Aligned Residues69
% Identity13%Templatec3oibB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50. ........60........ .70.........80.. .......90.........100.........110.
Predicted Secondary structure 



....



.







..












Query SS confidence 








. . . .
















.













. .




























Query Sequence  PDNWTMNGE. . . . YGSEFGGFFPVQVRFTP. AHERFHLALCSPGD. . VSQVWVLVLVNAGGEPFAVVQVQRRFASE
Query Conservation 
 

  


....
 














.
 
  

 




 .. 

 
 


   


  
 
   
 
 

Alig confidence 








....
















.













..




























Template Conservation    
  
 
 
  

    

   
 
            


     

         
     
  
 
  
 

 
Template Sequence  GDHYVINGAKTYITSGVRADYVVTAARTGGPGAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPV
Template Known Secondary structure  TTTTTT
S
SSSSGGGTT
TT


SS
TTS
G
Template Predicted Secondary structure 






































Template SS confidence 











































































   167..170.........180.........190.........200.........210.........220.........230.........240..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions