|   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | G | K | T | V | S | V | T | M | I | R | E | G | F | V | E | Q | N | E | I | P | E | E | L | P | L | L | P | K | E | S | R | Y | W | L | R | E | I | L | L | C | A | D | G | E | P | W | L | A | G | R | T | V | V | P | V | S | T | L | S | G | P | E | L | A | L | Q | K | L | G | K | T | P | L | G | R | Y | L | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |
Template Sequence |   |
L | V | R | R | R | P | A | T | K | V | L | V | N | T | V | V | P | A | T | A | E | I | A | A | A | L | G | V | A | E | D | S | E | V | H | R | I | E | R | L | R | L | T | H | G | E | P | X | A | Y | L | C | N | Y | L | P | P | G | L | V | D | L | D | T | G | Q | L | E | A | T | . |
. |
. |
G | L | Y | R | L | X | R |
Template Known Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
|
| T | T |  |  |  |  | S | . | . | . |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
. | . | 140 | . | . | . | . |
  |
  |   |
121 | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
|
|
| . |
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | S | S | . |
T | L | T | R | D | F | I | E | I | G | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | G | L | W | G | R | R | S | R | L | R | L | S | G | K | P | L | L | L | T | E | L | F | L | P | A |
Query Conservation |   |
  |   |   | . |   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
A | A | G | I | T | L | H | S | A | R | Q | S | I | G | A | R | A | A | T | S | G | E | A | E | R | L | G | E | D | A | G | A | P | L | L | T | X | E | R | T | T | F | D | D | T | G | R | A | V | E | F | G | T | H | T | Y | R | P |
Template Known Secondary structure |   |
 | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | T |
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |