Job Description P39293 Confidence 4.75% Date Thu Jan 5 11:59:00 GMT 2012 Rank 16 Aligned Residues 59 % Identity 24% Template d1kvpa_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) ssDNA viruses Microviridae-like VP Resolution UNK

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		R	L	L	E	D	E	L	L	I	A	L	P	G	E	E	F	T	V	A	A	V	S	H	I	D	L	.	.	.	.	.	.	.	.	.	G	G	G	S	Q	I	F	R	Y	Y	T	S	.	.	.	.	.	G	D	E	F	L	Q	I	N	T	T	G	G	E	D	I	D	D	I	D	D	I	K
Query Conservation																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.													.	.	.	.	.											.
Template Conservation																																																																.
Template Sequence		R	L	I	T	I	S	T	T	P	V	I	A	G	D	S	F	E	M	D	A	V	G	A	L	R	L	S	P	L	R	R	G	L	A	I	D	S	T	V	D	I	F	T	F	Y	V	P	H	R	H	V	Y	G	E	Q	W	I	K	F	M	K	D	.	G	V	N	A	T	P	L	P	T	V	N
Template Known Secondary structure													T	T																B	S	S	S																G	G	G	S	S	T	T								T	.	T	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.		.	.	1090	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions