|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | |
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |
|
|  |  |  |  |
|  |  | . |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | F | Q | R | L | F | G | K | D | N | K | P | A | I | A | R | G | P | L | . |
G | L | H | L | N | S | G | F | T | L | D | T | L | . |
A | F | R | L | L | E | D | E | L | L | I | A | L | P | G | E | E | F | T | V | A | A | V | S | H | I | D | L | G | G | G | S | . |
Q | I | F | R | Y | Y | T | S | G | D | E | F |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |   |   |   |
|
|   |
|   |   |
|
| . |
|
|   |
|
|   |   |
|   |
|
|   |
| . |   |   |
|
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |
|   | . |   |
|   |
|
|
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   | . |   |
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
|   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |
|   |   |
|   |
|
Template Sequence |   |
G | L | F | D | K | . |
L | K | S | L | V | S | T | I | E | I | I | A | P | L | S | G | E | I | V | N | I | E | D | V | P | D | V | V | F | A | E | K | I | V | G | D | G | I | A | I | K | P | T | G | N | K | M | V | A | P | V | D | G | T | I | G | K | I | F | E | T | N | H | A | F | S | I | E | S | D | S | G | V | E |
Template Known Secondary structure |   |
|
|
| T | T | . | S |
|
|
|
|
|
|  |  |  |  |
| S | S |
|  |  |  |  |
| G | G | G | S | S | S |  |  |  |  | T | S | S | S |
|  |  |  |  |  |  |  |
| S | S |  |  |  |
| S | S | S |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  | T | T | S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|  | . |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | |
. | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | Q | I | N |
Query Conservation |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|
|
Template Sequence |   |
L | F | V | H |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
87 | . | . | 90 |
  |