Job Description P39293 Confidence 3.10% Date Thu Jan 5 11:59:00 GMT 2012 Rank 28 Aligned Residues 67 % Identity 22% Template d1gff1_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) ssDNA viruses Microviridae-like VP Resolution 3.00

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		R	L	L	E	D	E	L	L	I	A	L	P	G	E	E	F	T	V	A	A	V	S	H	I	D	L	.	.	.	.	.	.	.	.	.	G	G	G	S	Q	I	F	R	Y	Y	T	S	.	.	.	.	.	G	D	E	F	L	Q	I	N	T	T	G	G	E	D	I	D	D	I	D	D	I	K	L	F	V	Y	E	E
Query Conservation																												.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.													.	.	.	.	.											.
Template Conservation																																																																.
Template Sequence		R	L	K	T	I	S	W	T	P	V	V	A	G	D	S	F	E	C	D	M	V	G	A	I	R	L	S	P	L	R	R	G	L	A	V	D	S	R	V	D	I	F	S	F	Y	I	P	H	R	H	I	Y	G	Q	Q	W	I	N	F	M	K	D	.	G	V	N	A	S	P	L	P	P	V	T	C	S	S	G	W	D
Template Known Secondary structure		B											T	T																B	S	S	S			S													S					T										.	G	G	G											S	S	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		104	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		105	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions