Job Description P39293 Confidence 2.27% Date Thu Jan 5 11:59:00 GMT 2012 Rank 57 Aligned Residues 67 % Identity 12% Template c3ts3D_ PDB info PDB header:viral protein Chain: D: PDB Molecule:capsid polyprotein; PDBTitle: crystal structure of the projection domain of the turkey astrovirus2 capsid protein at 1.5 angstrom resolution Resolution 1.49 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	A	V	S	H	I	D	L	G	G	G	S	Q	I	F	R	Y	Y	T	S	G	D	E	F	L	Q	I	N	T	T	G	G	E	D	I	D	D	I	D	D	I	K	L	F	V	Y	E	E	S	Y	G	I	S	K	E	S	H	W	R	E	A	I	N	A	K	A	M
Query Conservation
Alig confidence											.								.
Template Conservation											.								.
Template Sequence		P	V	I	S	M	G	D	T	N	.	G	R	R	A	A	L	F	.	Y	R	T	S	D	E	K	Y	I	L	F	F	S	T	T	E	D	P	G	A	Q	Y	Q	N	L	K	M	L	Y	F	W	N	W	S	Y	S	D	T	K	Q	Q	F	L	D	H	L	R	T	V	Q	F
Template Known Secondary structure									T	T	.								.			T	T	T	T									S	S				T	T	S		S											T	T													S
Template Predicted Secondary structure											.								.
Template SS confidence
		564	.	.	.	.	.	570	.	.		.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions