Job Description P39293 Confidence 1.97% Date Thu Jan 5 11:59:00 GMT 2012 Rank 75 Aligned Residues 39 % Identity 18% Template c3lqzB_ PDB info PDB header:immune system Chain: B: PDB Molecule:hla-dp2 beta chain linked with dra peptide; PDBTitle: crystal structure of hla-dp2 Resolution 3.25 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		P	G	E	E	F	T	V	A	A	V	S	H	I	D	L	G	G	G	S	.	.	Q	I	F	R	Y	Y	T	S	G	D	E	F	L	Q	I	N	T	T	G	G
Query Conservation																					.	.
Alig confidence																					.	.
Template Conservation
Template Sequence		S	P	E	N	Y	L	F	Q	G	R	Q	E	C	Y	A	F	N	G	T	Q	R	F	L	E	R	Y	I	Y	N	R	E	E	F	V	R	F	D	S	D	V	G
Template Known Secondary structure																		S	S											T	T								T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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