Job Description P39293 Confidence 3.17% Date Thu Jan 5 11:59:00 GMT 2012 Rank 26 Aligned Residues 42 % Identity 21% Template c1iebD_ PDB info PDB header:histocompatibility antigen Chain: D: PDB Molecule:mhc class ii i-ek; PDBTitle: histocompatibility antigen Resolution 2.70 Å

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		46	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																.	.	.	.
Query SS confidence									.	.	.																.	.	.	.
Query Sequence		I	A	L	P	G	E	E	.	.	.	F	T	V	A	A	V	S	H	I	D	L	G	G	G	S	.	.	.	.	Q	I	F	R	Y	Y	T	S	G	D	E	F	L	Q	I	N	T	T	G	G
Query Conservation									.	.	.																.	.	.	.
Alig confidence									.	.	.																.	.	.	.
Template Conservation
Template Sequence		G	S	G	G	G	G	S	R	P	W	F	L	E	Y	C	K	S	E	C	H	F	Y	N	G	T	Q	R	V	R	L	L	V	R	Y	F	Y	N	L	E	E	N	L	R	F	D	S	D	V	G
Template Known Secondary structure						S	S																S	S	T	T	S	S										T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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