Job Description P39293 Confidence 2.72% Date Thu Jan 5 11:59:00 GMT 2012 Rank 40 Aligned Residues 123 % Identity 14% Template c1ey2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homogentisate 1,2-dioxygenase; PDBTitle: human homogentisate dioxygenase with fe(ii) Resolution 2.30 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.												.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	E	F	T	V	A	A	V	S	H	I	D	L	G	G	G	S	Q	I	F	R	Y	Y	T	S	.	.	.	.	.	.	.	.	.	.	.	G	D	E	F	L	Q	I	N	T	T	G	G	E	D	I	D	D	I	D	D	I	K	L	F	V	Y	E	E	S	Y	G	I	S	K	E	S	H	W	R	E	A	I	N
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	H	T	L	C	G	A	G	D	I	K	S	N	N	G	L	A	I	H	I	F	L	C	N	T	S	X	E	N	R	C	F	Y	N	S	D	G	D	F	L	I	V	P	Q	K	G	N	L	L	I	Y	T	E	F	G	K	X	L	V	Q	P	N	E	I	C	V	I	Q	R	G	X	R	F	S	I	D	V	F
Template Known Secondary structure		T	T										T	T	T	T												S				S						S	S										S							T	T							T	T							T	T								S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		119												120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.										.	.	.																						.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.										.	.	.																						.	.
Query Sequence		A	.	.	.	.	.	.	.	.	.	.	.	K	A	M	G	A	M	T	L	N	.	.	.	W	Q	E	K	R	W	Q	R	F	F	N	S	E	E	P	G	N	I	E	P	V	.	.	Y	M	L	E	K	V	E	N	Q	N	H	A	K	W	E	V	H	N	F	T	M	G	Y
Query Conservation			.	.	.	.	.	.	.	.	.	.	.										.	.	.																						.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.										.	.	.																						.	.
Template Conservation
Template Sequence		E	E	T	R	G	Y	I	L	E	V	Y	G	V	H	F	E	L	P	D	L	G	P	I	G	A	N	G	L	A	N	P	R	D	F	L	I	P	I	A	W	Y	E	D	R	Q	V	P	G	G	Y	T	V	I	N	K	Y	Q	G	K	L	F	A	A	K	Q	D	V	S	P	F
Template Known Secondary structure		S	S										S				B					G	G	G	T	T	S		B	S		G	G	G																								T	T											S
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions