Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE95
Confidence3.80%DateThu Jan 5 11:22:49 GMT 2012
Rank37Aligned Residues56
% Identity21%Templated1hvca_
SCOP infoAcid proteases Acid proteases Retroviral protease (retropepsin)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........ 30.........40.........50.. .......60.........70.........80..
Predicted Secondary structure 


.......
..













Query SS confidence 








. . . . . . .






















. .





























Query Sequence  HAVEVEVPG. . . . . . . LLTDHTVSSIGHDFYRAFSDKWE. . SDYTGNLTINERPSARWGSWITITVNQDVI
Query Conservation     
 

 
.......



 
 

 
 


  

    ..
    



 
 

   



 
      
Alig confidence 








.......






















..












......










Template Conservation    
 
 
 
     
 

   
 







 


  
           
  

......   
 
 

  
Template Sequence  DQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFGGSSGPQITLWQRP. . . . . . LVTIKIGGQLK
Template Known Secondary structure  TTS
SS

GGGT

TTTTSS
SSS

......TT
Template Predicted Secondary structure 


















......

Template SS confidence 






































































  
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions