Job Description P0AE28 Confidence 45.88% Date Thu Jan 5 11:22:22 GMT 2012 Rank 84 Aligned Residues 79 % Identity 11% Template d1dbqa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.20

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		130	.	.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		H	Q	V	G	V	I	V	P	V	.	.	.	.	.	.	E	E	M	L	P	V	Q	A	Q	K	W	Q	I	L	Q	K	S	P	V	F	S	L	G	N	P	I	H	D	S	E	Q	K	I	I	D	A	G	K	E	L	L	A	K	G	A	D	V	I	M	L	D	C	L	G	F	H	Q	R	H	R	D	L	L	Q	K
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.																							.	.	.
Template Conservation																																							.	.	.
Template Sequence		K	S	I	G	L	L	A	T	S	S	E	A	A	Y	F	A	E	I	I	E	A	V	E	K	N	C	F	Q	K	G	Y	T	L	I	L	G	N	.	.	.	A	W	N	N	L	E	K	Q	R	A	Y	L	S	M	M	A	Q	K	R	V	D	G	L	L	V	M	C	S	E	Y	P	E	P	L	L	A	M	L	E	E
Template Known Secondary structure									S		T	T	S																		T								.	.	.		T	T															T	T		S							S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		204	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	V	P	V	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	H	I	P	M	V	V
Template Known Secondary structure		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions