Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE28
Confidence49.84%DateThu Jan 5 11:22:22 GMT 2012
Rank76Aligned Residues110
% Identity14%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90........ .100.........110.........120......... 130.........140.........150..
Predicted Secondary structure 



.















..



Query SS confidence 






















.






























. .






















Query Sequence  ERDLQGVVEVLDNQGYDVILLMS. TANISSMTARNTIFLEPSRILPPLVSSIVED. . HQVGVIVPVEEMLPVQAQKWQIL
Query Conservation     

  
  

  
 
 




.

 

 
     


 
  

   
 

   .. 







 

      

   
Alig confidence 






















.










.....














..






















Template Conservation     
   
  
   

 

   




   

  
.....
  
             

 

   
  
 
  
  
   
Template Sequence  KASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSE. . . . . REQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRY
Template Known Secondary structure  TT
SSSGGGTGGGS
.....TTTS


SS
Template Predicted Secondary structure 












.....









Template SS confidence 















































































   24.....30.........40.........50........ .60.........70.........80.........90........
 
   153......160...... ...170.........180. ........190
Predicted Secondary structure 








.

..



Query SS confidence 













.














. .








Query Sequence  QKSPVFSLGNPIHD. SEQKIIDAGKELLAK. . GADVIMLDC
Query Conservation           


  .       

  
   ..








Alig confidence 













.














..








Template Conservation 


 
 
  
 
   
   
      
       

 


 
Template Sequence  GFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNI
Template Known Secondary structure  T
S


SS


TTT


Template Predicted Secondary structure 
















Template SS confidence 








































   99100.........110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions