Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE28
Confidence61.12%DateThu Jan 5 11:22:22 GMT 2012
Rank54Aligned Residues110
% Identity11%Templatec3dz1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 1.87a resolution
Resolution1.87 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90........ .100.........110.........120......... 130.........140.........150...
Predicted Secondary structure 



.















.




Query SS confidence 






















.






























.























Query Sequence  ERDLQGVVEVLDNQGYDVILLMS. TANISSMTARNTIFLEPSRILPPLVSSIVED. HQVGVIVPVEEMLPVQAQKWQILQ
Query Conservation     

  
  

  
 
 




.

 

 
     


 
  

   
 

   . 







 

      

    
Alig confidence 






















.









.....















.























Template Conservation         
  
   

 

 
 




   

  .....

  
            

 

   
   

  
  
   
Template Sequence  DVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAA. . . . . EAEAVATRFIKRAKSXQVIVGVSAPGFAAXRRLARLSXDAG
Template Known Secondary structure  TT
SSTGGGTGGGS
.....
TTS


SST
Template Predicted Secondary structure 











.....









Template SS confidence 















































































   26...30.........40.........50......... 60.........70.........80.........90.........100
 
   154.....160.........170.........180. ........190
Predicted Secondary structure 









...



Query SS confidence 



























. . .








Query Sequence  KSPVFSLGNPIHDSEQKIIDAGKELLAK. . . GADVIMLDC
Query Conservation          


         

  
   ...








Alig confidence 



























...








Template Conservation 

 
 
 

            
  
  
    


 


 
Template Sequence  AAGVXIAPPPSLRTDEQITTYFRQATEAIGDDVPWVLQDY
Template Known Secondary structure 
S


TT

S
TTS

Template Predicted Secondary structure 
















Template SS confidence 







































   101........110.........120.........130.........140
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions