Job Description P0AE28 Confidence 86.06% Date Thu Jan 5 11:22:22 GMT 2012 Rank 29 Aligned Residues 147 % Identity 12% Template c3bleA_ PDB info PDB header:transferase Chain: A: PDB Molecule:citramalate synthase from leptospira interrogans; PDBTitle: crystal structure of the catalytic domain of licms in2 complexed with malonate Resolution 2.00 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.												.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																										.												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	D	N	Q	L	A	H	V	S	R	R	K	V	E	R	D	L	Q	G	V	V	E	V	.	L	D	N	Q	G	Y	D	V	I	L	L	.	.	.	.	M	S	T	A	N	I	.	.	.	.	.	.	.	.	.	.	.	S	S	M	T	A	R	N	T	I	F	L	E	P	S	R	I	L	P	P	L	V	S	S
Query Conservation																										.												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																	.												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		L	R	D	G	E	Q	T	.	R	G	V	S	F	S	T	S	E	K	L	N	I	A	K	F	L	L	Q	K	L	N	V	D	R	V	E	I	A	S	A	R	V	S	K	G	E	L	E	T	V	Q	K	I	M	E	W	A	A	T	E	Q	L	T	E	R	I	E	I	L	G	F	V	D	G	N	K	T	V	D	W	I
Template Known Secondary structure						T	T	S	.	T	T																		T	T			S							T	T	S		T	T															T	T		G	G	G							S	S	T	T
Template Predicted Secondary structure									.
Template SS confidence
		15	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		126	.	.	.		130	.	.	.	.	.	.	.	.																	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Query SS confidence						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Query Sequence		I	V	E	D	.	H	Q	V	G	V	I	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	P	V	Q	A	Q	K	W	Q	I	L	Q	K	S	P	V	F	S	.	.	.	L	G	N	P	I	H	D	S	E	Q	K	I	I	D	A	G	K	E	L	L	A	K	G	A	D	.
Query Conservation						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Alig confidence						.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																										.
Template Conservation
Template Sequence		K	D	S	G	A	K	V	L	N	L	L	T	K	G	S	L	H	H	L	E	K	Q	L	G	K	T	P	K	E	F	F	T	D	V	S	F	V	I	E	Y	A	I	K	S	G	L	K	I	N	V	Y	L	E	D	W	S	N	G	F	R	N	S	P	D	Y	V	K	S	L	V	E	H	L	S	K	E	H	I	E	R
Template Known Secondary structure					T											S								T																					T	T									T																					T	S			S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		185	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		V	I	M	L	D	C	L	G	F	.	.	.	.	.	.	H	Q	R	H	R	D	L	L	Q	K	Q	L	D	V	P	V
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	L	P	D	T	L	G	V	L	S	P	E	E	T	F	Q	G	V	D	S	L	I	Q	K	Y	P	D	I	H	F
Template Known Secondary structure							T	T																				T	T	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions