Job Description P0AE28 Confidence 40.85% Date Thu Jan 5 11:22:22 GMT 2012 Rank 97 Aligned Residues 85 % Identity 14% Template c2yv4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein ph0435; PDBTitle: crystal structure of c-terminal sua5 domain from pyrococcus horikoshii2 hypothetical sua5 protein ph0435 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	I	L	P	P	L	V	S	S	I	V	E	D	H	Q	V	G	V	I	V	P	V	E	E	M	L	P	V	Q	A	Q	K	W	Q	I	L	Q	K	S	P	V	F	S	L	G	N	P	I	H	D	S	E	Q	K	I	I	D	A	G	K	E	L	L	A	K	G	A	D	V	I	M	L	D	C	L	G	F	H	Q
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	I	T	E	L	V	K	E	L	K	E	R	G	K	K	V	G	V	I	G	S	E	S	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	A	D	E	F	F	F	L	G	S	S	V	E	E	V	A	K	N	L	F	K	A	L	R	Y	X	D	K	A	G	V	D	V	V	I	A	E	G	V	E	E	R	G
Template Known Secondary structure														T	T								S	S		.	.	.	.	.	.	.	.	.	.	.	.	T	T		S							S	S																		T	T		S								S	G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	R	D	L	L	Q	K	Q	L	D	V	P	V	L	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	A	V	X	N	R	L	S	G	Y	K	I	V	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions