Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE28
Confidence32.43%DateThu Jan 5 11:22:22 GMT 2012
Rank119Aligned Residues110
% Identity15%Templatec2rfgB_
PDB info PDB header:lyaseChain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90........ .100.........110.........120......... 130.........140.........150..
Predicted Secondary structure 



.















..



Query SS confidence 






















.






























. .






















Query Sequence  ERDLQGVVEVLDNQGYDVILLMS. TANISSMTARNTIFLEPSRILPPLVSSIVED. . HQVGVIVPVEEMLPVQAQKWQIL
Query Conservation     

  
  

  
 
 




.

 

 
     


 
  

   
 

   .. 







 

      

   
Alig confidence 






















.










.....














..






















Template Conservation         
  
   

 

   




   

  
.....
  
             

 

   
   

  
  
   
Template Sequence  EKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEE. . . . . HKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQA
Template Known Secondary structure  TT
STTSGGGTGGGS
.....TTSS
B


SST
Template Predicted Secondary structure 











.....










Template SS confidence 















































































   20.........30.........40.........50.... .....60.........70.........80.........90....
 
   153......160...... ...170.........180. ........190
Predicted Secondary structure 








.

.



Query SS confidence 













.














.








Query Sequence  QKSPVFSLGNPIHD. SEQKIIDAGKELLAK. GADVIMLDC
Query Conservation           


  .       

  
   .








Alig confidence 













.














.








Template Conservation 


 
 
 

 
   
   
      

 
  


 


 
Template Sequence  GADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPIIVYNI
Template Known Secondary structure  T
S


TTT



SS

Template Predicted Secondary structure 
















Template SS confidence 







































   95....100.........110.........120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions