 |
Job Description | P0AE28 | Confidence | 28.59% | Date | Thu Jan 5 11:22:22 GMT 2012 |
Rank | 137 | Aligned Residues | 85 |
% Identity | 22% | Template | c2qy9A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:cell division protein ftsy; |
PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
|
Resolution | 1.90 Å |
|
 |
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | P | P | L | V | S | S | I | V | E | D | . |
H | Q | V | G | V | I | V | P | V | E | E | M | L | P | V | Q | A | Q | . |
. |
K | W | Q | I | L | Q | K | S | P | V | F | S | L | G | N | P | I | H | D | S | E | Q | K | I | I | D | A | G | K | E | L | L | A | K | G | A | D | V | I | M | L | D | C | L | G | F | H |
Query Conservation |   |
|
|   |   |   |
|   |
|
|   |   |   | . |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
T | I | G | K | L | A | R | Q | F | E | Q | Q | G | K | S | V | M | L | A | A | G | D | T | F | R | A | A | A | V | E | Q | L | Q | V | W | G | Q | R | N | N | I | P | V | I | A | Q | H | T | G | . |
A | D | S | A | S | V | I | F | D | A | I | Q | A | A | K | A | R | N | I | D | V | L | I | A | D | T | A | G | R | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
| S | T | T | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|
| G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
309 | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | |
. | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . |
  |
  |   |
195 | . | . | . | . | 200 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | H | R | D | L | L | Q | K |
Query Conservation |   |
  |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
Template Sequence |   |
Q | N | K | S | H | L | M | E | E |
Template Known Secondary structure |   |
G | G |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
388 | . | 390 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|