Job Description P0AE28 Confidence 96.78% Date Thu Jan 5 11:22:22 GMT 2012 Rank 16 Aligned Residues 181 % Identity 11% Template c2jfzB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor Resolution 1.86 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.		.	.	.	.	.
Predicted Secondary structure																												.	.	.																																							.	.	.					.
Query SS confidence																												.	.	.																																							.	.	.					.
Query Sequence		S	L	L	G	K	L	S	R	E	E	V	M	A	E	Y	A	P	E	A	G	E	D	T	I	L	T	.	.	.	L	L	N	D	N	Q	L	A	H	V	S	R	R	K	V	E	R	D	L	Q	G	V	V	E	V	L	D	N	Q	G	Y	D	V	I	L	L	M	S	.	.	.	T	A	N	I	.	S	S	M	T	A
Query Conservation																												.	.	.																																							.	.	.					.
Alig confidence																			.									.	.	.								.	.	.																													.	.	.					.
Template Conservation																			.																			.	.	.
Template Sequence		S	G	V	G	G	F	S	V	L	K	S	L	L	K	A	R	L	.	F	D	E	I	I	Y	Y	G	D	S	A	R	V	P	Y	G	T	K	.	.	.	D	P	T	T	I	K	Q	F	G	L	E	A	L	D	F	F	K	P	H	E	I	E	L	L	I	V	A	C	N	T	A	S	A	L	A	L	E	E	M	Q	K
Template Known Secondary structure		S	S	G	G	G										T	T		.		S								T	T	T				T	T	S	.	.	.																	G	G	G	T		S													T
Template Predicted Secondary structure																			.																			.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.												.	.	.	.	.	.	170
Predicted Secondary structure																					.	.	.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	T	I	F	L	E	P	S	R	I	L	P	P	L	V	S	S	I	.	.	.	.	.	V	E	D	H	Q	V	G	V	I	V	P	V	E	E	M	L	P	V	Q	A	Q	K	W	.	Q	I	L	Q	K	S	P	V	F	S	L	G	N	P	.	.	.	.	.	.	.	.	.	.	.	I	H	D	S	E	Q	K
Query Conservation																					.	.	.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.												.	.	.	.	.																								.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		Y	S	K	I	P	I	.	.	V	G	V	I	E	P	S	I	L	A	I	K	R	Q	V	E	D	K	N	A	P	I	L	V	L	G	T	K	A	T	I	Q	S	N	A	Y	D	N	A	L	K	Q	Q	G	Y	L	N	I	S	H	L	A	T	S	L	F	V	P	L	I	E	E	S	I	L	E	G	E	L	L	E	T
Template Known Secondary structure		T		S	S			.	.			S	S														T	T	S														T									T	T										T	T							T	T			S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		84	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.									.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.
Query Sequence		I	I	D	A	G	K	E	L	L	A	K	G	A	D	V	I	M	L	D	C	L	G	F	H	Q	R	H	R	D	L	L	Q	K	Q	L	D	V	.	.	.	.	.	.	.	.	P	V	L	L	S	N	V	L	I	A	R	L	A	A	E
Query Conservation																																							.	.	.	.	.	.	.	.
Alig confidence																										.													.	.	.	.	.	.	.	.
Template Conservation																										.
Template Sequence		C	M	H	Y	Y	F	T	P	L	E	I	L	P	E	V	I	I	L	G	C	T	H	F	P	.	L	I	A	Q	K	I	E	G	Y	F	M	G	H	F	A	L	P	T	P	P	L	L	I	H	S	G	D	A	I	V	E	Y	L	Q	Q
Template Known Secondary structure								T	T			S			S						S	T	T	G	G	.	G	G												S			S	S
Template Predicted Secondary structure																										.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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