Job Description P0AE28 Confidence 70.17% Date Thu Jan 5 11:22:22 GMT 2012 Rank 39 Aligned Residues 127 % Identity 15% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																			.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	D	N	Q	L	A	H	V	S	R	R	K	V	E	R	D	L	Q	G	V	V	E	V	L	D	N	Q	G	Y	D	V	I	L	L	M	S	T	A	N	I	S	S	M	T	A	R	N	T	I	F	L	E	P	S	R	I	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																											.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																											.	.	.	.
Template Sequence		P	R	D	G	L	Q	N	E	.	K	Q	P	I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	A	G	L	D	Y	I	E	V	.	.	.	.	G	S	F	V	S	P	K	W	V	P	Q	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P	N	L	K	G	F	E
Template Known Secondary structure		T	T					T	S	.	S	S																	T	T		S					.	.	.	.				S		T	T	T		G	G	G	T	T								S				T	T	S								S
Template Predicted Secondary structure										.																											.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		124	.	.	.	.	.		130	.	.	.	.	.	.	.	.																	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		S	S	I	V	E	D	.	H	Q	V	G	V	I	V	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	M	L	P	V	Q	A	Q	K	W	Q	I	L	Q	K	S	P	V	F	S	L	G	N	P	I	.	.	.	.	.	.	H	D	S	E	Q	K	I	I	D	A	G	K	E	L	L	A
Query Conservation								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence								.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q
Template Known Secondary structure						T	T										S										S	S																			T	T										T	T		B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.		.	190	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		K	G	A	D	V	I	M	L	.	D	C	L	G	F
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		M	G	C	Y	E	V	S	L	G	D	T	I	G	V
Template Known Secondary structure		T	T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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