Job Description P0AE28 Confidence 96.36% Date Thu Jan 5 11:22:22 GMT 2012 Rank 18 Aligned Residues 185 % Identity 14% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.												.	.	.	.													.	.	.																																	.
Query SS confidence												.	.	.	.	.	.	.												.	.	.	.													.	.	.																																	.
Query Sequence		H	S	L	L	G	K	L	S	R	E	.	.	.	.	.	.	.	E	V	M	A	E	Y	A	P	E	A	G	.	.	.	.	E	D	T	I	L	T	L	L	N	D	N	Q	.	.	.	L	A	H	V	S	R	R	K	V	E	R	D	L	Q	G	V	V	E	V	L	D	N	Q	G	Y	D	V	I	L	L	M	S	.
Query Conservation												.	.	.	.	.	.	.												.	.	.	.													.	.	.																																	.
Alig confidence												.	.	.	.	.	.	.												.	.	.	.													.	.	.																																	.
Template Conservation
Template Sequence		I	G	I	L	G	G	M	G	P	L	A	T	A	E	L	F	R	R	I	V	I	K	T	P	A	K	R	D	Q	E	H	P	K	V	I	I	F	N	N	P	Q	I	P	D	R	T	A	Y	I	L	G	K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M	P	A	N
Template Known Secondary structure								S	S														T	S			S	S	G	G	G	S									T	T	S									S	S																			T		S							S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
				99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.																														.	.									.																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																														.	.									.																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	T	A	N	I	S	S	M	T	A	R	N	T	I	F	L	E	P	S	R	I	L	P	P	L	V	S	S	I	V	.	.	E	D	H	Q	V	G	V	I	.	V	P	V	E	E	M	L	P	V	Q	A	Q	K	W	Q	I	L	Q	K	S	P	V	F	S	L	G	N	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.																														.	.									.																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																.	.													.	.									.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		T	A	H	A	F	V	E	D	I	R	K	A	I	K	I	P	I	.	.	I	S	M	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	T	G	T	I	V	S	G	V	Y	E	K	E	F	S	K	Y	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E
Template Known Secondary structure		G	G	G	G	G									S	S		B	.	.														T	T		S														T									T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
							163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	P	I	H	D	S	E	Q	K	I	I	D	A	G	K	E	L	L	A	K	G	A	D	V	I	M	L	D	C	L	G	F	H	Q	R	H	R	D	L	L	Q	K	Q	L	D	V	P	V	L	L	S	N	V	L	I	A	R	L	A	A	E	L
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																							.	.	.
Template Conservation																																													.	.	.
Template Sequence		G	V	K	A	G	N	L	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	E	R	G	A	E	C	I	I	A	G	C	T	E	V	S	V	V	L	K	Q	D	.	.	.	D	L	K	V	P	L	I	D	P	M	D	V	I	A	E	V	A	V	K	V
Template Known Secondary structure					T	T																			T	T		S	S					S									G	G	.	.	.	G		S	S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions