Return to main results Retrieve Phyre Job Id

Job DescriptionP23256
Confidence100.00%DateThu Jan 5 11:39:19 GMT 2012
Rank71Aligned Residues366
% Identity17%Templated3tata_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30...... ...40.........50...... ...60...... ...70.....
Predicted Secondary structure 





















.....







..









.
Query SS confidence 
































. . . . .



















. .









.








Query Sequence  FSKVVDRHGTWCTQWDYVADRFGTADLLPFTIS. . . . . DMDFATAPCIIEALNQRLMH. . GVFGYSRWKN. DEFLAAIAH
Query Conservation 
     
                   

 
  
.....         
  
       ..    
     .  

 


 
Alig confidence 
































.....



















..









.








Template Conservation             
  
      
     
 
  
             

  
             
    
   

 


 
Template Sequence  FQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAP
Template Known Secondary structure 









TTTTS

SS

S

S


TTSS



TTS

SS




TT

Template Predicted Secondary structure 











































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   76...80.........90.. .......100....... ..110.........120.........130.........140.........150.
Predicted Secondary structure 




..

..





















Query SS confidence 
















. .














. .











































Query Sequence  WFSTQHYTAIDSQTVVY. . GPSVIYMVSELIRQW. . SETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDM
Query Conservation        
     
 
  ..
 
   

      
..   

 


  
 
          
                   
Alig confidence 
















..














..



































.






Template Conservation                
 
  
 
   

      
    


 


  
 
          
     
     .       
Template Sequence  LLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDE. ATNGVRF
Template Known Secondary structure  T
SS
TT


BS
SS



SS

TTTTT







T.TTSS

Template Predicted Secondary structure 























.





Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150....... ..160....
 
   152.......160 .........170.........180.........190.........200.........210. ........220......
Predicted Secondary structure 

..





























...







Query SS confidence 








. .


















































. . .














Query Sequence  GKLEAVLAK. . PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGE. . . QPHIPWSNVARGDWA
Query Conservation    
      ..           
 
         
  
   
      

 

 
       ...               
Alig confidence 








..


















































...














Template Conservation        
         
      



   
   
  
   
      

 



            
           
Template Sequence  NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPAL
Template Known Secondary structure  TT

SS



SSS
SSS




TT



BS
TTSSS
TTT


Template Predicted Secondary structure 





































Template SS confidence 















































































   171........180.........190.........200.........210.........220.........230.........240.........250
 
   227..230.........240.........250...... ...260.........270.........280... ......290......
Predicted Secondary structure 












....








......
Query SS confidence 





























. . . .


























. . . . . .












Query Sequence  LLTSGSKSFNIPALTGAYGIIENSSSRDAY. . . . LSALKGRDGLSSPSVLALTAHIAAYQQ. . . . . . GAPWLDALRIYLK
Query Conservation     
 

     


 
             ....                           ......             
Alig confidence 





























....


























......












Template Conservation     
 

     
 


  
               
                      
                     
Template Sequence  VSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMRTRIL
Template Known Secondary structure 
B

T
TTT

B


SSTTTTTTTSS

SS
Template Predicted Secondary structure 
























Template SS confidence 















































































   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   297..300.........310. ........320.........330.........340.........350.........360......... 370...
Predicted Secondary structure 



..























.

Query SS confidence 














. .

























































.



Query Sequence  DNLTYIADKMNAAFP. . ELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG. CPRS
Query Conservation       
         ..      
       
           
   

   

 
 

  
       



  .   
Alig confidence 














..
















......



















..........




.



Template Conservation    
  
   
                
 
    
......       

 
  
   

 ..........


 
 
   
Template Sequence  AMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGL. . . . . . SAAQVDRLREEFGVYLIASG. . . . . . . . . . RMCVAGLNTA
Template Known Secondary structure  TTTTT
TTS
TT

SSB




......
TTTT


SSS..........

BTTS

TT
Template Predicted Secondary structure 













......





..........



Template SS confidence 















































































   332.......340.........350.........360..... ....370.........380..... ....390.....
 
   374.....380......
Predicted Secondary structure 
Query SS confidence 












Query Sequence  KLEKGVAGLINAI
Query Conservation   
   
 

   
Alig confidence 












Template Conservation   
  
  

  

Template Sequence  NVQRVAKAFAAVM
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 












   396...400........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions