Job Description P23256 Confidence 99.83% Date Thu Jan 5 11:39:19 GMT 2012 Rank 223 Aligned Residues 312 % Identity 15% Template d2ctza1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.60

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																						.																																																										.	.
Query SS confidence																						.																																																										.	.
Query Sequence		I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	.	.
Query Conservation																						.																																																										.	.
Alig confidence																						.																		.	.	.	.																																					.	.
Template Conservation																																								.	.	.	.
Template Sequence		P	E	H	A	A	N	L	F	A	L	K	E	F	G	N	I	Y	S	R	I	M	N	P	T	V	D	V	L	E	K	R	L	A	A	L	E	G	G	.	.	.	.	K	A	A	L	A	T	A	S	G	H	A	A	Q	F	L	A	L	T	T	L	A	Q	A	G	D	N	I	V	S	T	P	N	L	Y	G	G	T	F
Template Known Secondary structure										T	T	T	T	G	G	G	S		B	T	T	B																T		.	.	.	.	S						S	S															T	T							S
Template Predicted Secondary structure																																								.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
				124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D
Query Conservation		.	.
Alig confidence		.	.																	.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																				.	.	.	.	.	.	.																																		.	.	.	.
Template Sequence		N	Q	F	K	V	T	L	K	R	L	G	I	E	V	R	F	T	S	.	.	.	.	.	.	.	R	E	E	R	P	E	E	F	L	A	L	T	D	E	K	T	R	A	W	W	V	E	S	I	G	N	P	A	L	N	I	P	D	.	.	.	.	L	E	A	L	A	Q	A	A	R	E	K	G	V	A	L	I	V	D
Template Known Secondary structure						T					T	T								.	.	.	.	.	.	.	T	T												T	T								S	S		T	T	T						.	.	.	.												T
Template Predicted Secondary structure																				.	.	.	.	.	.	.																																		.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																															250	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		N	T	F	G	M	G	G	Y	L	L	R	P	L	.	.	.	.	.	.	A	W	G	A	A	L	V	T	H	S	L	T	K	W	V	G	G	H	G	A	V	I	A	G	A	I	V	D	G	G	N	F	P	W	E	G	G	R	Y	P	L	L	T	E	P	Q	P	G	Y	H	G	L	R	L	T	E	A	F	G	E	L
Template Known Secondary structure			G	G	G	G	G	G	T	S			G	G	.	.	.	.	.	.	G	G	T		S						T	T	T	T	T	T		S	S											S		S			T	T	T	T						S		B	G	G	G	T	T	B							G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		A	F	I	V	K	A	R	V	D	G	L	R	D	Q	G	Q	A	L	G	P	F	E	A	W	V	V	L	L	G	M	E	T	.	.	.	.	L	S	L	R	A	E	R	H	V	E	N	T	L	H	L	A	H	W	L	L	E	Q	P	Q	V	A	W	V	N	Y	P	G	L	P	H	H	P	H	H	D	R	A	Q	K
Template Known Secondary structure										T																						T	T	.	.	.	.																					T		T	T							T	T	S	T	T		T	T
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
						319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																						.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	V	R	L	N	A	G	C	P	R	S
Query Conservation		.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																									.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																														.																																																	.	.
Template Sequence		Y	F	K	G	K	P	G	A	V	L	T	F	G	L	K	G	G	Y	E	A	A	K	R	F	I	S	R	L	.	K	L	I	S	H	L	A	N	V	G	D	T	R	T	L	A	I	H	P	A	S	T	T	H	S	Q	L	S	P	E	E	Q	A	Q	A	G	V	S	P	E	M	V	R	L	S	V	G	L	.	.	E
Template Known Secondary structure				T	T				S							T	T											T		.	S	S	S				S					S	S						G	G	G	T	T	T	T	T	S									T			T	T								S	.	.	S
Template Predicted Secondary structure																														.																																																	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.
		374	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	K	G	V	A	G	L	I	N	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	E	D	L	K	A	E	L	K	E	A	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions