Job Description P23256 Confidence 99.88% Date Thu Jan 5 11:39:19 GMT 2012 Rank 205 Aligned Residues 331 % Identity 12% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.															.
Query SS confidence																						.	.	.	.															.
Query Sequence		F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	.	.	.	.	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W
Query Conservation																						.	.	.	.															.
Alig confidence																.						.	.	.	.															.																	.	.
Template Conservation																.																																									.	.
Template Sequence		L	G	G	G	V	R	S	H	H	V	P	P	V	V	.	Q	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	G	.	.	L	E	I	A	N	A	S	M	Y	D	G	A	T	A	L	A	E	G	V	L	L	A	L
Template Known Secondary structure				S	S											.					T	S								S			S	G	G	G																				T	.	.	S	S				S		B	S	S
Template Predicted Secondary structure																.																																									.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
			108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.																					.	.	.	.
Query SS confidence		.																					.	.	.	.
Query Sequence		.	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	.	.	.	.	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D
Query Conservation		.																					.	.	.	.
Alig confidence		.																					.	.	.	.																						.	.	.	.	.	.	.	.															.	.									.	.
Template Conservation																																																.	.	.	.	.	.	.	.															.	.									.	.
Template Sequence		R	E	T	G	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	L	L	T	L	P	L	E	G	G	R	T	P	L	P	.	.	.	.	.	.	.	.	E	V	G	E	E	V	G	A	V	V	V	Q	N	P	.	.	N	F	L	G	A	L	E	D	.	.
Template Known Secondary structure					T								T	T	S															T	T									B	T	T	B					.	.	.	.	.	.	.	.				T	T								S	S	.	.		T	T	S	B				.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.															.	.									.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.									.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence		.																														.	.	.																																								.	.	.	.	.	.	.	.
Template Conservation		.																														.	.	.
Template Sequence		.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	G	V	L	K	P	.	.	.	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P	H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E
Template Known Secondary structure		.											T	T									T	T	G	G	G	T	S			.	.	.					T		S							T	T	T	T				G	G	G		S									G	G	G	G	G	G			S
Template Predicted Secondary structure		.																														.	.	.
Template SS confidence
			214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
																				255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L	K	S	V	E	M	A	H	K	L	H	A	L	L	L	E	V	P	G	V	R	P	F
Template Known Secondary structure					T	T	S									G	G	G	S					G	G	G	S	S					S																																								T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	.	.	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I
Query Conservation																																																							.	.
Alig confidence													.	.																	.							.																	.	.
Template Conservation													.	.																	.							.
Template Sequence		T	P	K	P	F	F	N	E	F	A	L	.	.	A	L	P	K	D	P	E	A	V	R	R	A	L	A	E	R	.	G	F	H	G	A	T	.	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E	L	H	E	E	E	D	L	L	A	L	R	E	A	L	K	E	V	L
Template Known Secondary structure		S		S	S	B		S					.	.			S	S												T	.	T						.				T	T	S		S	S								T	T
Template Predicted Secondary structure													.	.																	.							.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions