Job Description P23256 Confidence 99.97% Date Thu Jan 5 11:39:19 GMT 2012 Rank 120 Aligned Residues 373 % Identity 14% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.																													.
Query SS confidence																																			.	.	.	.	.	.																													.
Query Sequence		K	V	V	D	R	H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	D	M	.	.	.	.	.	.	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S
Query Conservation																																			.	.	.	.	.	.																													.
Alig confidence																																			.	.	.	.	.	.							.																						.												.
Template Conservation																																															.																																		.
Template Sequence		K	S	V	E	T	V	S	M	I	S	R	D	E	R	V	K	K	M	Q	E	A	G	Y	N	T	F	L	L	N	S	K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	.	M	S	D	K	Q	W	A	G	M	M	I	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	.
Template Known Secondary structure		S																				T	T	T		G	G	G	S		G	G	G		S				S		S	S	S				.									T	T	S					S	S	S																.
Template Predicted Secondary structure																																															.																																		.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.
Query Sequence		T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	.	.	.	.	.	.	.	Q	A	D	G	W	F	C	D	M
Query Conservation																																																																		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																.																										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																.
Template Sequence		.	.	.	.	.	.	.	G	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S	Q	L	A	I	K	P	G	Q	Y	V	A	G	.	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	D	L
Template Known Secondary structure		.	.	.	.	.	.	.			S						S	S															T	T						.	S	S												T	T							B		G	G	G	G		T	T				S		T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.																																.
Template SS confidence
									89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		152	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																									.	.	.	.	.	.	.	.	.
Query Sequence		G	K	L	E	A	V	L	A	K	P	E	C	K	.	.	.	.	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	.	.	.	.	.	.	.	.	.	M	D	M	V	W	G	E	Q	P	H	I	P	W	S
Query Conservation															.	.	.	.																																									.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	K	L	A	T	L	I	K	E	K	G	A	E	N	I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I
Template Known Secondary structure													G	G	G								S	S	B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	.	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		V	H	E	M	F	S	Y	A	D	G	C	T	M	S	G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K
Template Known Secondary structure							T	T		S						T	T	T	T	T			S	S							S																T			T	T	T	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.								.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.												.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	.	.	.	.	.	.	.	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	.	.	.	.	.	.	.	.	.	.	.	P	G	Y	T	Y	G	E	E
Query Conservation																																.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.
Template Sequence		Q	V	R	Y	L	G	D	K	L	R	E	A	.	.	G	V	P	I	V	E	P	T	G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P
Template Known Secondary structure													T	.	.	T			B		S	S			S	S											T	T	S		G	G	G															S							S						B		S	S	S			B
Template Predicted Secondary structure														.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		G	R	G	F	V	R	L	N	A	G	C	.	.	.	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V	R
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		K	L	E	T	V	R	L	T	I	P	R	R	V	Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y	Q	H	K	E
Template Known Secondary structure		S										T	T	S																		T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low