Job Description P23256 Confidence 99.89% Date Thu Jan 5 11:39:19 GMT 2012 Rank 204 Aligned Residues 343 % Identity 14% Template d1bj4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.65

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.
Predicted Secondary structure																												.	.	.	.	.	.	.											.																													.
Query SS confidence																												.	.	.	.	.	.	.											.																													.
Query Sequence		L	P	F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	.	.	.	.	.	.	.	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	.	S	V	I	Y	M	V	S
Query Conservation																												.	.	.	.	.	.	.											.																													.
Alig confidence										.	.																	.	.	.	.	.	.	.											.																													.
Template Conservation										.	.
Template Sequence		L	E	L	I	A	S	E	N	.	.	F	A	S	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	E	G	Y	P	G	Q	R	Y	Y	G	G	T	E	F	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	K	L	D	P	Q	C	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	F
Template Known Secondary structure						T	T			.	.											T	S	G	G	G	T							T	T			S	S	S																				T	T			T	T	T								S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		48	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.									.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	.	.	.	.	.	.	.	.	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	Y	T	A	L	V	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	P	Y	K	V	N	P	D	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	R	L	F	H	P	K	L	I	I	A	G	T	S	C	Y
Template Known Secondary structure								T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S							S	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence						.	.	.	.	.																																					.	.	.															.	.														.	.	.
Template Conservation						.	.	.	.	.																																					.	.	.															.	.
Template Sequence		S	R	N	L	.	.	.	.	.	E	Y	A	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	.	.	.	E	H	C	H	V	V	T	T	T	T	H	K	T	L	.	.	R	G	C	R	A	G	M	I	F	Y	R	K	G	V	K	S
Template Known Secondary structure			S			.	.	.	.	.												T	T								G	G	G						T	T	S	S			G	G	.	.	.	G	T		S						S	S	G	G	G	.	.				S									S
Template Predicted Secondary structure						.	.	.	.	.																																					.	.	.															.	.
Template SS confidence
		206	.	.	.						210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
													251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																																																.
Template Conservation																																																																												.
Template Sequence		V	D	P	A	T	G	K	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	L	E	F	K	V	Y	Q	H	Q	V	V	A	N	C	R	A	L	S	E	A	L	T	E	L	G	Y	K	I	.	V	T	G	G	S
Template Known Secondary structure				T	T	T																	T	T	T	T			S																T	T	S																								T	T				.	T	T	S	S
Template Predicted Secondary structure																																																																												.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.																		.	.	.	.	.	.
Query Sequence		S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	.	.	.	.	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	.	.	.	.	.	.	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A
Query Conservation																																		.	.	.	.																		.	.	.	.	.	.
Alig confidence																									.									.	.	.	.					.													.	.	.	.	.	.
Template Conservation																									.																	.
Template Sequence		D	N	H	L	I	L	V	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	.	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	R	.	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D	F	Q	K	V	A	H	F	I	H	R	G	I	E	L
Template Known Secondary structure		S	S	S						G	G	G	G	T											.			T	T									T	T		S	.		T	T	S														T	T
Template Predicted Secondary structure																									.																	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.		.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions