Phyre 2 alignment of P23256 with c3qi6B

Job Description P23256
Confidence 99.93% Date Thu Jan 5 11:39:19 GMT 2012

Rank 168 Aligned Residues 308

% Identity 15% Template c3qi6B_

PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99

Resolution 1.91 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	G	V	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V
Query Conservation
Alig confidence								.																					.	.	.	.
Template Conservation								.																					.	.	.	.
Template Sequence	R	G	G	Y	E	Y	A	.	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	D	A	.	.	.	.	A	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W
Template Known Secondary structure	B	T	T	B		B	T	.	T	T																T	T		.	.	.	.	S						S	S															T	T							T	T												T	G	G	G	G
Template Predicted Secondary structure								.																					.	.	.	.
Template SS confidence
	51	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

	136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I
Query Conservation
Alig confidence									.	.	.	.																																	.	.	.	.
Template Conservation									.	.	.	.																																	.	.	.	.
Template Sequence	N	V	E	Y	T	P	V	A	.	.	.	.	L	A	D	L	D	A	V	R	A	A	I	R	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	.	.	.	.	I	A	G	I	A	Q	L	G	A	D	S	S	A	K	V	L	V	D	N	T	F	A	S	P	A	L	Q	Q	P	L	S	L
Template Known Secondary structure	T								.	.	.	.	T	T											T	T								S	S		T	T	T						.	.	.	.											T	T								T	T	T		T	T	T			G	G	G	G
Template Predicted Secondary structure									.	.	.	.																																	.	.	.	.
Template SS confidence
	126	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

	216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	.	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y
Query Conservation																																																														.
Alig confidence	.	.	.	.	.	.	.																																																							.
Template Conservation	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K	T	L	V	L	R	M	Q	R	H	S	E	N	A	A	A
Template Known Secondary structure	.	.	.	.	.	.	.	T		S										S		S	S										S																																T	T
Template Predicted Secondary structure	.	.	.	.	.	.	.
Template SS confidence
								198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

	295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.										.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	.	.	.	.	.	.	.	.	.	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																										.																	.	.	.	.	.	.
Template Conservation																																																										.
Template Sequence	V	A	E	F	L	A	E	H	P	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	G	R	T	A	A	E	Q	L	C	A	K	T	.	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M
Template Known Secondary structure							T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T													.	S	S	S				S					S	S						T	T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
	272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

								360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.
Query SS confidence	.	.	.	.	.	.	.
Query Sequence	.	.	.	.	.	.	.	G	R	G	F	V	R	L	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I
Query Conservation	.	.	.	.	.	.	.
Alig confidence	.	.	.	.	.	.	.												.	.
Template Conservation																			.	.
Template Sequence	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	.	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure				S					T	T								S	.	.	S
Template Predicted Secondary structure																			.	.
Template SS confidence
	351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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