Job Description P23256 Confidence 21.85% Date Thu Jan 5 11:39:19 GMT 2012 Rank 263 Aligned Residues 171 % Identity 18% Template c3q45E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family; PDBTitle: crystal structure of dipeptide epimerase from cytophaga hutchinsonii2 complexed with mg and dipeptide d-ala-l-val Resolution 3.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	D	M	D	.	.	.	.	.	.	.	.	.	.	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	.	.	.	.	.	.	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S
Query Conservation																											.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																.											.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																.
Template Sequence		I	A	L	Y	D	L	A	A	Q	H	A	G	L	P	.	L	Y	A	F	L	G	G	K	K	D	K	I	I	Q	T	D	Y	T	V	S	I	D	E	P	H	K	M	A	A	D	A	V	Q	I	K	K	N	G	F	E	I	I	K	V	K	V	G	G	S	K	E	L	D	V	E	R	I	R	M	I	R	E	A	A	G
Template Known Secondary structure													T	S	B	.					T	T					S				B						S																T	T		S								S
Template Predicted Secondary structure																.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	.	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V
Query Conservation																																															.
Alig confidence															.	.	.													.	.																.																					.	.	.	.
Template Conservation															.	.	.													.	.																																					.	.	.	.
Template Sequence		D	S	I	T	L	R	I	D	A	N	Q	G	W	.	.	.	S	V	E	T	A	I	E	T	L	T	L	L	.	.	E	P	Y	N	I	Q	H	C	E	E	P	V	S	R	N	L	Y	T	A	L	P	K	I	R	Q	A	C	R	I	P	I	M	A	D	E	S	.	.	.	.	C	C	N	S	F	D	A	E	R	L
Template Known Secondary structure		S	S	S							T	T		B	.	.	.													.	.	G	G	G			S						B		G	G	G	G	G	G									S	S					S	T	T	.	.	.	.			S
Template Predicted Secondary structure															.	.	.													.	.																																					.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		I	Q	I	Q	A	C	D	S	F	N	L	K	L	S	K	S	A	G	.	.	.	.	.	I	T	N	A	L	N	I	I	R	L	A	E	Q	A	H	M	P	V	Q	V
Template Known Secondary structure				T	T			S						T	T	T	T	T	S	.	.	.	.	.														T	T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions