Job Description P23256 Confidence 99.95% Date Thu Jan 5 11:39:19 GMT 2012 Rank 145 Aligned Residues 345 % Identity 16% Template c3l44A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase 1; PDBTitle: crystal structure of bacillus anthracis heml-1, glutamate semialdehyde2 aminotransferase Resolution 2.05 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																												.	.						.																										.
Query SS confidence																												.	.						.																										.
Query Sequence		H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	.	.	D	M	D	F	A	.	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D
Query Conservation																												.	.						.																										.
Alig confidence												.	.	.	.	.												.	.						.																										.												.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																																																									.	.	.	.	.	.	.
Template Sequence		R	G	K	G	A	Y	F	W	D	V	.	.	.	.	.	D	G	N	K	Y	I	D	Y	L	A	A	Y	G	P	I	I	T	G	H	A	H	P	H	I	T	K	A	I	T	T	A	A	E	N	G	V	L	Y	G	T	P	T	A	L	E	V	K	F	A	K	X	L	K	E	A	X	.	.	.	.	.	.	.	P	A
Template Known Secondary structure					B	T					T	.	.	.	.	.	T									G	G	G	T	T		S	S		B	T																S			S	S																	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure												.	.	.	.	.																																																									.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.														.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	.	.	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M
Query Conservation																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		L	D	K	V	R	F	V	N	S	G	T	E	A	V	X	T	T	I	R	V	A	R	A	Y	T	G	R	T	K	I	X	K	F	A	G	C	Y	H	G	H	S	D	L	V	L	V	A	L	G	T	P	D	S	A	G	V	P	Q	S	I	A	Q	E	V	I	T	V	P	.	.	.	.	.	.	.	.	F	N	N	V
Template Known Secondary structure			S						S	S																									T	T					S	S	G	G	G	G	B					B	S	S	T	T							T	T						.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.
		152	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		G	K	L	E	A	V	L	A	.	.	.	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L
Query Conservation										.	.	.
Alig confidence										.	.	.																																																																	.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		E	T	L	K	E	A	L	D	K	W	G	H	E	V	A	A	I	L	V	E	P	I	V	G	N	F	G	I	V	E	P	K	P	G	F	L	E	K	V	N	E	L	V	H	E	A	G	A	L	V	I	Y	D	E	V	I	T	A	F	R	F	X	Y	G	G	A	Q	D	L	L	G	V	T	P	D	.	.	.	.	L
Template Known Secondary structure												G	G	G								S	S	B		T	T	S		B				T	T											T	T	T								T	T	T	T	T	T	S	S	S	S							T				S	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	.	.	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M
Query Conservation																																																								.	.
Alig confidence							.	.																																																.	.
Template Conservation							.	.
Template Sequence		T	A	L	G	V	.	.	I	G	G	G	L	P	I	G	A	Y	G	G	K	K	E	I	X	E	Q	V	A	P	L	G	P	A	Y	Q	A	G	T	X	A	G	N	P	A	S	X	A	S	G	I	A	C	L	E	V	L	Q	Q	E	G	L	Y	E	K	L	D	E	L	G	A	T	L	E	K	G	I	L	E	Q	A
Template Known Secondary structure							.	.	T	T	T	T	S	S												T	T	B	T	T	T	S	S	B					T	T	T	T																T	S	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		266	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	C	P	R	S	K
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																								.	.	.	.	.	.	.	.	.	.	.	.												.									.	.	.	.	.	.
Template Conservation					.	.																																															.									.	.	.	.	.	.
Template Sequence		A	K	H	.	.	N	I	D	I	T	L	N	R	L	K	G	A	L	T	V	Y	F	T	T	N	T	I	E	D	Y	D	A	A	Q	D	T	D	G	E	X	F	G	K	F	F	K	L	X	L	Q	E	.	G	V	N	L	A	P	S	K	.	.	.	.	.	.	Y	E	A	W	F	L	T	T	E	H	T	K	E	D
Template Known Secondary structure				T	.	.	T									T	T							S	S	S				S							S															T	.	T					S	S	T	.	.	.	.	.	.	T							T	T
Template Predicted Secondary structure					.	.																																															.									.	.	.	.	.	.
Template SS confidence
		345	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.	410	.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	G	V	A	G	L	I	N	A	I	R	A	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Y	T	I	E	A	V	G	R	A	F	A	A	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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