Job Description P23256 Confidence 99.86% Date Thu Jan 5 11:39:19 GMT 2012 Rank 216 Aligned Residues 342 % Identity 13% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.											.
Query SS confidence																												.	.	.	.	.	.	.											.
Query Sequence		L	P	F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	.	.	.	.	.	.	.	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E
Query Conservation																												.	.	.	.	.	.	.											.
Alig confidence										.	.																	.	.	.	.	.	.	.											.																			.	.	.
Template Conservation										.	.																																																					.	.	.
Template Sequence		L	E	M	I	A	S	E	N	.	.	F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	.	.	.	F	A	N	V	Q	P	H	S	G	A	Q	A	N	A	A
Template Known Secondary structure						T	T			.	.											T	S	G	G	G	G							T	T			S	S	S																					T		S	.	.	.							S	S
Template Predicted Secondary structure										.	.																																																					.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	.	.	.	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W
Query Conservation																									.	.	.
Alig confidence																									.	.	.																																																					.	.
Template Conservation																																																																																.	.
Template Sequence		V	L	H	A	L	M	S	P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	A	G	W	S	A	Y	P	R	V	L	.	.
Template Known Secondary structure									T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S							S	S			S			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A
Query Conservation
Alig confidence		.	.	.																																							.	.	.											.	.	.																	.
Template Conservation		.	.	.																																							.	.	.											.	.	.																	.
Template Sequence		.	.	.	D	F	A	A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	.	.	.	A	D	V	V	S	T	T	V	H	T	.	.	.	L	G	G	G	R	S	G	L	I	V	G	K	Q	Q	Y	A	.	K	A	I	N	S	A
Template Known Secondary structure		.	.	.													T								T	T	T						T	T	S	S			S	T	T	T	.	.	.		S									.	.	.					S								G	G	G		.
Template Predicted Secondary structure		.	.	.																																							.	.	.											.	.	.																	.
Template SS confidence
					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.												.
Query SS confidence																																																			.	.	.												.
Query Sequence		L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	.	.	.	A	F	P	E	L	N	W	Q	I	P	Q	.	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D
Query Conservation																																																			.	.	.												.
Alig confidence																																																			.	.	.												.
Template Conservation
Template Sequence		V	F	P	G	Q	Q	G	G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P	L	D	G
Template Known Secondary structure			T	T	T	T		S	S																	T	S																						S	S						T	T				G	G	G	S		S	S	S							T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure																	.	.	.	.																			.	.	.	.	.	.
Query SS confidence																	.	.	.	.																			.	.	.	.	.	.
Query Sequence		N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	.	.	.	.	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	.	.	.	.	.	.	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V	R
Query Conservation																	.	.	.	.																			.	.	.	.	.	.
Alig confidence									.								.	.	.	.																			.	.	.	.	.	.
Template Conservation									.
Template Sequence		Q	A	A	E	D	L	L	.	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A	T	G	S
Template Known Secondary structure									.			T	T									T	T		S	S		T	T	T		S													T																			S	G	G
Template Predicted Secondary structure									.
Template SS confidence
		331	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions