Return to main results Retrieve Phyre Job Id

Job DescriptionP23256
Confidence65.90%DateThu Jan 5 11:39:19 GMT 2012
Rank237Aligned Residues113
% Identity13%Templatec3gh7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-hexosaminidase; PDBTitle: crystal structure of beta-hexosaminidase from paenibacillus2 sp. ts12 in complex with galnac
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   81........90.........100......... 110.. .......120. ..
Predicted Secondary structure 








..


................



...................
Query SS confidence 




























. .


. . . . . . . . . . . . . . . .








. . . . . . . . . . . . . . . . . . .

Query Sequence  HYTAIDSQTVVYGPSVIYMVSELIRQWSE. . TGE. . . . . . . . . . . . . . . . GVVIHTPAY. . . . . . . . . . . . . . . . . . . DA
Query Conservation   
     
 
  
 
   

      
  .. 

................ 


  
 
...................  
Alig confidence 




























..


................








...................

Template Conservation 
 
 
    


 
 
  
  





 


                

   
 
 
    

 


  
       

 
Template Sequence  YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR
Template Known Secondary structure 
SSSSS
TTTT
SS


S




S
S
SSS


Template Predicted Secondary structure 






































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   124.....130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 


































Query SS confidence 











































































Query Sequence  FYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVI
Query Conservation          
                     
                 
 
         
  
   
      

Alig confidence 



















.


















.....






























Template Conservation   

 

  
 
 






 .   


    
 
   

 .....          

  
  


 

   

 

Template Sequence  QIDLASQYKINKFHMHLSDD. QGWRIEIKSWPDLIEIGSK. . . . . GQVGGGPGGYYTQEQFKDIVSYAAERYIEVI
Template Known Secondary structure  TTT


B
S.S
B
B

TTSTTTTS.....

GGG




B
TTT
Template Predicted Secondary structure 





.









.....














Template SS confidence 











































































   181........190.........200 .........210......... 220.........230.........240.........250
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions