Job Description P23256 Confidence 99.93% Date Thu Jan 5 11:39:19 GMT 2012 Rank 170 Aligned Residues 317 % Identity 14% Template c3ecdC_ PDB info PDB header:transferase Chain: C: PDB Molecule:serine hydroxymethyltransferase 2; PDBTitle: crystal structure of serine hydroxymethyltransferase from burkholderia2 pseudomallei Resolution 1.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T
Query Conservation
Alig confidence										.	.																	.	.	.				.																						.	.	.
Template Conservation										.	.																	.	.	.				.																						.	.	.
Template Sequence		V	E	L	I	A	S	E	N	.	.	I	V	S	R	A	V	L	D	A	Q	G	S	V	L	T	N	.	.	.	K	Y	A	.	E	G	Y	D	E	V	E	A	L	A	I	E	R	V	K	R	L	F	N	A	G	.	.	.	H	A	N	V	Q	P	H	S	G	A	Q	A	N	G	A	V	M	L	A	L	A	K	P
Template Known Secondary structure						T	T			.	.											T	S	G	G	G	S	.	.	.	S		T	.	T																	T	T		S	.	.	.							S	S															T
Template Predicted Secondary structure										.	.																	.	.	.				.																						.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Sequence		G	D	T	V	L	G	M	S	L	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	Y	G	V	S	R	D	T	M	L	I	D	Y	D	Q	V	E	A	L	A	Q	Q	H	K	P	S	L	I	I	A	G	F	S	A	Y	P	R	K	L	.	.	.	.	.	D	F	A	R	F	R	A	I
Template Known Secondary structure		T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B		T	T	T		S	B															S							S			S	S			.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.																.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S
Query Conservation
Alig confidence																															.	.	.															.	.																					.	.	.	.	.	.
Template Conservation																															.	.	.															.	.																					.	.	.	.	.	.
Template Sequence		A	D	S	V	G	A	K	L	M	V	D	M	A	H	I	A	G	V	I	A	A	G	R	H	A	N	P	V	E	.	.	.	H	A	H	V	V	T	S	T	T	H	K	T	L	R	.	.	G	P	R	G	G	F	V	L	T	N	D	E	E	I	A	K	K	I	N	S	.	.	.	.	.	.	A	V	G	P	L	M
Template Known Secondary structure					T	T								T	T	T						T	T	S	S			G	G	G	.	.	.	T		S						S	S	G	G	G		.	.	S		S							S											.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.															.	.																					.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	.	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A
Query Conservation																																																			.
Alig confidence																																									.	.									.																								.
Template Conservation																																									.	.																																	.
Template Sequence		H	V	I	A	G	K	A	V	A	F	G	E	A	L	T	D	D	F	K	T	Y	I	D	R	V	L	A	N	A	Q	A	L	G	D	V	L	K	A	G	.	.	G	V	D	L	V	T	G	G	T	D	N	H	L	L	L	V	D	L	R	P	K	G	L	K	G	A	Q	V	E	Q	A	L	.	E	R	A	G	I	T
Template Known Secondary structure															T	S																								T	.	.	T				G	G	G	S		S	S	S							G	G	G	T											.			T	T
Template Predicted Secondary structure																																									.	.																																	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.
		350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure			.	.	.	.																			.	.	.	.	.	.
Query SS confidence			.	.	.	.																			.	.	.	.	.	.
Query Sequence		I	.	.	.	.	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	.	.	.	.	.	.	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V	R
Query Conservation			.	.	.	.																			.	.	.	.	.	.
Alig confidence			.	.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	K	N	G	I	P	F	D	P	E	K	P	T	I	T	S	G	I	R	L	G	T	P	A	G	T	T	R	G	F	G	A	A	E	F	R	E	V	G	R	L	I	L	E	V	F	E	A	L	R
Template Known Secondary structure								T	T		S	S		T	T	T		S												T	T																					T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions