Job Description P23256 Confidence 99.87% Date Thu Jan 5 11:39:19 GMT 2012 Rank 211 Aligned Residues 323 % Identity 10% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.			110
Predicted Secondary structure																	.	.	.	.	.	.											.	.																														.															.	.
Query SS confidence																	.	.	.	.	.	.											.	.																														.															.	.
Query Sequence		T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	.	.	.	.	.	.	G	V	F	G	Y	S	R	W	K	N	.	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	.	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	.	.	T
Query Conservation																	.	.	.	.	.	.											.	.																														.															.	.
Alig confidence																	.	.	.	.	.	.											.	.																			.											.															.	.
Template Conservation																																																					.
Template Sequence		L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	A	V	P	.	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V	P	L	N	L	I	G	L	K	A
Template Known Secondary structure													T	S	S	S	G	G	G	S	S	S		T	T	T			T	T	S																			T			.	T	T							S	S														G	G	G	S	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L
Query Conservation
Alig confidence																																						.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																						.	.																																	.	.	.	.	.	.	.	.
Template Sequence		G	R	C	A	D	Y	V	V	T	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	H	P	K	L	G	S	Y	.	.	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V	H	G	V	E	F	D	.	.	.	.	.	.	.	.	F	I
Template Known Secondary structure		T									S											T	T	T	S						S				S	S	S	.	.		S				G	G	G					T	T		S						S			T	T	T	T				S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																						.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.										.	.	.	.	260	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.
Query Sequence		C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	.	.	.	.	.	.	.	.	.	Y	L	S	A	L	K
Query Conservation																																																																			.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																		.	.															.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.																		.	.
Template Sequence		P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	.	.	.	.	.	.	.	.	K	F	G	V	I	F	A	G	A	Q	K	N	V	G	S	A	G	.	.	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L	R	E	C	P	S	V	L	E	Y	K	V	Q	A	G
Template Known Secondary structure					T	T								T	T	T	T	T	S	S				G	G	.	.	.	.	.	.	.	.	G		S						G	G	G	T	T	S		T	T	.	.								T	T	S		S				T	T	S		G	G	G							T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																												.																																	.	.	.	.																	.
Query SS confidence																												.																																	.	.	.	.																	.
Query Sequence		G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	.	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	.	.	.	.	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	.
Query Conservation																												.																																	.	.	.	.																	.
Alig confidence																												.																																	.	.	.	.																	.
Template Conservation
Template Sequence		N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	Q	G	F	Y	V	C	P	V	E	P	Q	N	R	S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D	A
Template Known Secondary structure		T	T	T		S	S																				T	T																						T	S	T	T	S					S		G	G	G	B		S	S							S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
				336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure		.	.																																			.	.
Query SS confidence		.	.																																			.	.
Query Sequence		.	.	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	.	.	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V	R
Query Conservation		.	.																																			.	.
Alig confidence		.	.								.												.	.	.	.												.	.
Template Conservation											.												.	.	.	.
Template Sequence		L	E	K	R	F	L	D	K	A	.	L	E	L	N	M	L	S	L	K	G	H	.	.	.	.	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M	H	Q
Template Known Secondary structure											.			T	T			S		B			.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure											.												.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.					.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions