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Job DescriptionP23256
Confidence99.95%DateThu Jan 5 11:39:19 GMT 2012
Rank147Aligned Residues327
% Identity12%Templatec3dr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100....... ..110...
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Query Sequence  ISDMDFATAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW. SETGEG
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Template Sequence  VAAPRL. . DGNERDYVLECMDTTWISSVGRFIVEFEKAFADYC. . . . . . . . GVKHAIACNNGTTALHLALVAMGIGPGDE
Template Known Secondary structure  S




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SST

SS
S........T
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T

TT
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Query Sequence  VVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCER
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Template Sequence  VIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDA. . . . . . AKLEALITPRTKAIMPVHLYGQICD. . . MDPILEVARR
Template Known Secondary structure  SSS
TTT

B
TTT
SB
G......GGTGGG

TT

B
GGG



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Query Sequence  HGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSAL. . . . . . . . . . . . K
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Template Sequence  HNLLVIEDAAEAVGATYRGKKSGSLGD. . . . . CATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFP
Template Known Secondary structure  TT

TT
TT
TTTTSSSS.....
BTTSSS

BS
S
BTT

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S
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   262.......270.........280.........290.........300.........310.. .......320.........330.........
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Query Sequence  GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPE. . LNWQIPQSTYLAWLDLRPLNIDDNALQ
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Template Sequence  IVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVI
Template Known Secondary structure  S


B
B

TGGGGGGG




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Query Sequence  KALIEQEKVAIMPGYTYGEE. . . . . . . . . . . . . . . . . . GRGFVRLNAG. . CPRSKLEKGVAGLINAI
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Template Sequence  KDL. DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL
Template Known Secondary structure  .TTB





GGGSGGGGGG

TT



TT


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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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