Job Description P23256 Confidence 36.19% Date Thu Jan 5 11:39:19 GMT 2012 Rank 251 Aligned Residues 170 % Identity 15% Template c3ddmD_ PDB info PDB header:lyase Chain: D: PDB Molecule:putative mandelate racemase/muconate lactonizing PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme from bordetella bronchiseptica rb50 Resolution 2.60 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.							60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	D	M	D	.	.	.	.	.	.	.	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	.	.	.	.	.	.	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H
Query Conservation																											.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																.											.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																.
Template Sequence		I	A	L	C	D	L	A	A	R	R	A	G	Q	P	.	L	W	A	W	L	G	G	S	G	D	R	I	G	V	Y	A	S	G	I	N	P	E	N	P	E	D	V	V	A	R	K	A	A	E	G	Y	R	A	F	K	L	K	V	G	F	D	D	A	R	D	V	R	N	A	L	H	V	R	E	L	L	G	A	A	T
Template Known Secondary structure													T		B	.					T	T		S													S	S													T									S	S																		S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	.	.	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A
Query Conservation																																												.	.
Alig confidence												.	.	.												.	.																	.	.																					.	.	.	.
Template Conservation												.	.	.												.	.																																							.	.	.	.
Template Sequence		P	L	M	A	D	A	N	Q	G	W	.	.	.	D	L	P	R	A	R	Q	M	A	Q	R	.	.	L	G	P	A	Q	L	D	W	L	E	E	P	L	R	A	D	R	P	A	A	E	W	A	E	L	A	Q	A	A	P	M	P	L	A	G	G	E	N	.	.	.	.	I	A	G	V	A	A	F	E	T	A	L	A
Template Known Secondary structure								T	T			.	.	.												.	.		G	G	G									S		T	T	S													S	S						T	T	.	.	.	.			S
Template Predicted Secondary structure												.	.	.												.	.																																							.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I
Query Conservation
Alig confidence																		.	.	.	.	.
Template Conservation																		.	.	.	.	.
Template Sequence		A	R	S	L	R	V	M	Q	P	D	L	A	K	W	G	G	.	.	.	.	.	F	S	G	C	L	P	V	A	R	A	V	V	A	A	G	L	R	Y	C
Template Known Secondary structure			T									T	T	T	T	T		.	.	.	.	.														T	T
Template Predicted Secondary structure																		.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions